Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02483 ATGAAGGGTTATTATGAGCCACGTTCAAGCTCTTCTTGTGCAGCTTGCAAGTTCTTGAAGAGAAGGTGCATACCCAATTGCATATTTGCACCGTACTTTCGCTCTGACGAGTGCAAGAAATTCGCCAAGGTGCACAAGGTGTTCGGGGCAAGCAATGTGAGCAAGATCCTCGTTGAGGTTCCTGAGGAACAGAGAGAGGACACGGTGAATTCACTTGCTTATGAGGCGGAAGCACGGCTTCGGGACCCGGTTTATGGATGCATTGGTGCCATAGCTCTGCTGCAAAGGAAGATGGTGGAGCTTCAACATGACCTTGCCATTGCTAAGGACCGTCTTGCTCGTTATGCTACTGCTGCTGCTACTGCTACCACCACCCCTTCTAATTCCACTTCTCATGATGCCTTCTTTAATGGCCACGTTAGTTTGCCACCCTTCCCTGATTTTTACACTTGTGCTGATAATTTCAATAATAATAATGACAACTTCTGCCACACCTCTTCTTCTCAATCATCATTGACCAGACATGAAACGGTGGATGATTTTATTCAAACCCCATATATATTTTGA 567 0.4586 MKGYYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILVEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARYATAAATATTTPSNSTSHDAFFNGHVSLPPFPDFYTCADNFNNNNDNFCHTSSSQSSLTRHETVDDFIQTPYIF 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02483 188 Coils Coil 91 111 - -
Gma02g02483 188 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 1 163 - -
Gma02g02483 188 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
Gma02g02483 188 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 163 - -
Gma02g02483 188 Pfam Lateral organ boundaries (LOB) domain 12 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02483 Gma-Chr2 50903496 50904176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02483 1 156 AS2 family AT3G11090 61.538 2.92e-63 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma02g02483 LOB 5.4e-38 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02483 02 50903496 50904176 Gma02g02483 02 50903496 50904176 ECH