Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02470 ATGGGTGGAAATTCCCCTTGTGCCTCATGCAAATTGCTGAGGCGTCGGTGCACAAAAGACTGCATCTTCGCTCCTTATTTTCCTTCTGATGACCCCCAAAAGTTTGCTATAGTTCACAAGGTTTTTGGTGCTAGCAATGTTAGCAAAATGTTACAGGAACTTCCAGTTCACCAGAGAGCAGATGCAGTGAGCAGTCTAGTGTATGAGGCAAATGCAAGAGTGAGGGACCCTGTGTATGGTTGTGTTGGAGCAATATCCTACTTGCAAAATCAAGTTTCTGAGCTTCAAATGCAGCTTGCAGTTGCTCAAGCAGAGATACTCTGCATCCAGATGGAACATGAGCCAGTGATGCCAGCAGCCTCAGGAATTGATCTAGACTACAAGTCTTACTTTCTCCAAAATGACCTCTCTCAGTTTCTTGGCTTTGACACTTCTAGCAATGTAATGCAGCAATTTTGCCCATGA 465 0.4473 MGGNSPCASCKLLRRRCTKDCIFAPYFPSDDPQKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMEHEPVMPAASGIDLDYKSYFLQNDLSQFLGFDTSSNVMQQFCP 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02470 154 Coils Coil 85 105 - -
Gma02g02470 154 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Gma02g02470 154 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Gma02g02470 154 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE 1 145 - -
Gma02g02470 154 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02470 Gma-Chr2 50779015 50779866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02470 3 132 AS2 family AT2G30130 81.203 4.12e-76 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma02g02470 LOB 3e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02470 - - gmx:100799327 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02470 02 50779015 50779866 Gma14g00476 14 4526036 4527047 ECH
Gma02g02470 02 50779015 50779866 Gma02g02470 02 50779015 50779866 ECH