Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02460 ATGCAACCACTGAACAAGCTTATCCCAGATGCTTTTGTGAAATGTACACGCTTACAAGGATGGAGGATCCCTGCGGATGTCATCCTCACAAATGTTGGTACGAGAGTTTGGAATGTGAAAACACGTCTTGTTAGAAACAAAATTTACTTTGAAGAGGGTTGGAAGGTTTTTCAAGAAGAAAACTTTGTAGGAAAAGAAGATTATCTTGTTTTTAAGTATGATGGGGCCAACATTTTCAAGGTTGTAATTCTTGAACAATCGTCACGGTGTGAAAAGACAgaagttgaagaagaagatgaggtgatagatattacagatgatgaagaacatgaagaagctgaggatgatgacaatgatgatgatgagtatagagacatggaagaagagagtgaagaacatagtgctgaaTACACGAAGAGTCAAACACATCCTCTTAGAGCCTCCAACAGGGAGAATGCTTCTAGTTCCAGTCCTATAGTTGAAGGTCCTCATCTTGAAGACTATGAAATCCACAAATGTATATTCAGCAGGGAGATCCATATTTTGAAGCAAAGCTCCTCAAATGCAGACCCAACGAATTGGTTAAAATCCTTATATGGTCTCTTCTAG 609 0.3103 MQPLNKLIPDAFVKCTRLQGWRIPADVILTNVGTRVWNVKTRLVRNKIYFEEGWKVFQEENFVGKEDYLVFKYDGANIFKVVILEQSSRCEKTEVEEEDEVIDITDDEEHEEAEDDDNDDDEYRDMEEESEEHSAEYTKSQTHPLRASNRENASSSSPIVEGPHLEDYEIHKCIFSREIHILKQSSSNADPTNWLKSLYGLF 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02460 202 MobiDBLite consensus disorder prediction 96 129 - -
Gma02g02460 202 SMART B3_2 1 87 IPR003340 GO:0003677
Gma02g02460 202 MobiDBLite consensus disorder prediction 93 161 - -
Gma02g02460 202 ProSiteProfiles B3 DNA-binding domain profile. 1 87 IPR003340 GO:0003677
Gma02g02460 202 Pfam B3 DNA binding domain 7 83 IPR003340 GO:0003677
Gma02g02460 202 PANTHER B3 DOMAIN-CONTAINING 7 154 - -
Gma02g02460 202 MobiDBLite consensus disorder prediction 140 159 - -
Gma02g02460 202 Gene3D - 4 90 IPR015300 -
Gma02g02460 202 SUPERFAMILY DNA-binding pseudobarrel domain 8 86 IPR015300 -
Gma02g02460 202 CDD B3_DNA 8 84 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02460 Gma-Chr2 50679626 50681412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02460 22 121 REM Transcription Factor Family AT3G06220 29.565 9.78e-11 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gma02g02460 B3 1.1e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02460 - - gsj:114383647 207.223