Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02448 ATGGTTTCCAAAGAGCAAAAGAGAGCAGCACTGCATGAGAAGCTGCAAAATCTTCGTTCTATTACTAACTCTCATGCTCTAAATAAAACTTCGATCATAGTCGATGCATCAAAGTATATCGAAAAGTTAAAGCAAAAGGTAGAAAGACTGAATCAAGAGATAGCCTCTGCAGAAACTTCAAGTGTCCACAACCCTTTGCCTATGGTTACAGTAGAAACCCTAGAAAAGGGATTTCTTATAAATGTTTTCTCGGCAAAAGGGTGTTCAGGTCTGCTTGTTTCCATATTGGAGGCCTTTGAAGAGATGAGACTCACTGTGCTTGAAGCTAGGGTTTCTTGTACAGACACTTTTCGATTTCAAGCAGTTGGAGAAAATGAAGAACAAGTGGAGACAATTGATGCACATGTTGTGAAACAAGCTGTGGTACAAGCAATAAAGAATTGGAGCAAAAGTGGCGATCAAGAAGAGTAA 471 0.3949 MVSKEQKRAALHEKLQNLRSITNSHALNKTSIIVDASKYIEKLKQKVERLNQEIASAETSSVHNPLPMVTVETLEKGFLINVFSAKGCSGLLVSILEAFEEMRLTVLEARVSCTDTFRFQAVGENEEQVETIDAHVVKQAVVQAIKNWSKSGDQEE 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02448 156 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 156 - -
Gma02g02448 156 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 2 156 - -
Gma02g02448 156 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 66 IPR036638 GO:0046983
Gma02g02448 156 Coils Coil 33 60 - -
Gma02g02448 156 Gene3D - 3 64 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02448 Gma-Chr2 50603940 50605465 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02448 - - gmx:100306253 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02448 02 50603940 50605465 Gma14g00453 14 4342475 4344045 ECH
Gma03g00322 03 5022576 5024360 Gma02g02448 02 50603940 50605465 ECH
Gma01g01329 01 46582158 46584335 Gma02g02448 02 50603940 50605465 ECH
Gma18g01949 18 52703996 52705362 Gma02g02448 02 50603940 50605465 ECH
Gma11g01817 11 20827860 20831725 Gma02g02448 02 50603940 50605465 ECH
Gma02g02448 02 50603940 50605465 Gma02g02448 02 50603940 50605465 ECH