Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02442 ATGGCTTCGTCTTGTTCTAGCTTTATGATCACTTTGGCCGTTTTGGTCCTTTTGTTGGGGACTAGTAGTGCCAATGCCAATCCAACACTTCACACAAACTTCTACTACAGttcttgcccaaaactctttgacactgtgaaacgcacagtggaatcggccatatcaaaggagacccgcatgggtgcttctctcctacgtttgttcttccacgattgctttgtcaatgggtgtgatgggtcaattctacttgatgacacatcaagcttcaccggagagaaaaacgcaggacctaacaggaactctgcccgtggttttgaagtgatcgatcaaattaagtcagctgtggaaaaagtgtgtccgggtgtggtctcttgcgctgacatccttgccatcgctgcaagagactccgttgAGATCCTTGGAGGCCCAACTTGGGATGTGAAACTTGGAAGAAGAGACTCCAGGACGGCAAGCCAATCTGCTGCCAACAATGACATCCCAAGACCCACTTCAAACCTCAACCAACTTATTTCCAGATTTAATGCTCTCGGACTTTCCACCAAAGACTTGGTCGCACTATCTGGGGGTCACACAATTGGACAAGCAAGGTGCACAACCTTTAGAGCCCGAATCTACAACGAGACCAACATAGATAGCTCTTTTGCTCGCATGAGACAATCTAGGTGTCCCCGAACCTCAGGGTCAGGGGACAACAACCTAGCACCCATTGACTTCGCCACTCCCAGGTTCTTTGACAACCACTACTTCAAGAACCTCATTCAGAAGAAGGGCCTCATCCATTCCGACCAACAACTCTTCAATGGTGGTTCCACTGACTCCATAGTGCGTACCTACAGCACCAACCCGGCCTCCTTTTTCGCCGATTTCTCCGCCGCCATGATCCGGATGGGAGACATTAGTCCCCTCACCGGCTCCCGCGGAGAAATAAGAGAGAACTGCCGGAGGGTCAACTAA 975 0.3446 MASSCSSFMITLAVLVLLLGTSSANANPTLHTNFYYSSCPKLFDTVKRTVESAISKETRMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKNAGPNRNSARGFEVIDQIKSAVEKVCPGVVSCADILAIAARDSVEILGGPTWDVKLGRRDSRTASQSAANNDIPRPTSNLNQLISRFNALGLSTKDLVALSGGHTIGQARCTTFRARIYNETNIDSSFARMRQSRCPRTSGSGDNNLAPIDFATPRFFDNHYFKNLIQKKGLIHSDQQLFNGGSTDSIVRTYSTNPASFFADFSAAMIRMGDISPLTGSRGEIRENCRRVN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02442 324 Pfam Peroxidase 46 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma02g02442 324 PANTHER PEROXIDASE 11 323 - -
Gma02g02442 324 CDD secretory_peroxidase 30 323 IPR033905 GO:0004601|GO:0042744
Gma02g02442 324 Gene3D Peroxidase, domain 2 167 303 - -
Gma02g02442 324 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma02g02442 324 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma02g02442 324 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma02g02442 324 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma02g02442 324 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma02g02442 324 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma02g02442 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma02g02442 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma02g02442 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma02g02442 324 SUPERFAMILY Heme-dependent peroxidases 30 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma02g02442 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Gma02g02442 324 PANTHER PEROXIDASE 72-RELATED 11 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma02g02442 324 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma02g02442 324 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma02g02442 324 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma02g02442 324 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma02g02442 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma02g02442 324 ProSiteProfiles Plant heme peroxidase family profile. 29 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma02g02442 324 Gene3D - 33 324 - -
Gma02g02442 324 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02442 Gma-Chr2 50572463 50574689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02442 30 324 Peroxidase AT5G05340 74.915 1.50e-168 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02442 K00430 - gmx:100791414 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02442 02 50572463 50574689 Gma14g00450 14 4315327 4317837 ECH
Gma11g01813 11 20775789 20785905 Gma02g02442 02 50572463 50574689 ECH
Gma18g00520 18 4893351 4895981 Gma02g02442 02 50572463 50574689 ECH
Gma02g02442 02 50572463 50574689 Gma02g02442 02 50572463 50574689 ECH