Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma02g02425 | ATGAAGAATAATAAATCACCCTTCTCCGCCGCCACCTTCACTCTCTTCAACGCCACCCTGTTAATCCTCTCTTCACTATCACCAACTCATGCCCTCGGTTCTGCCGCCACCCTCGCTGCCACCTCCTCCGCCGTATGCGGCGTGGTGGCATCGGAGCCGACGCGGCGCATTGCGTGCTACCGCCACGGCGAAGTCGTCGCCGTCGCCCCCAACGTTTCGTTCTCGGCGATCTCCGGCGGCCGGAGCTACTTCTGCGGCCTTCGCTCCGGCAACTACAGCCTCCTCTGCTGGGACACCCTCTCCGGCTTCCAAAGCAAGAGGCTTTACAACAATGGCACTGTTCTATTAGAGAATCTCGCCCTCGGAGACTCCCAGGTTTGCGCCACCGTGGTCGGCGCCGGAACGGCGTCGTGCTGGAGAACCAACGCCGCCTTCGAATCGCCATCTGGGTCGGACCGGTTTGATTCCATTTCATCTGGGTCGGGCTTCTCTTGCGGAATTTTGAAGGGTAGTGATCGGGTTCGGTGTTGGGGTGTTGGGTCCATAGCGAGAAAAATGGAGAGTGAGTTTGGGAACATGTCTTTGGTGAGTCTTGTGGCTGGGGAGTCACATATTTGTGGGTTGAATTCAAGTGGGTATTTGGTTTGTAGAGGAAGTAACGATTTTGGTCAAATTGATGTTCCTGAAGGAGGGGCTTTGGAGTTTTCTGGTTTGGCGCTTGGGGCTGAGCATACTTGTGCTATTCGGAGATCCAATGGTTCTGTCGTTTGTTGGGGTGGGAGAGGGTTGTTTGAGGATGATGTTACAAAAACTGTTTCTTTTGAGGTTATTGTTTCTGGGTCCAATTTTACTTGTGGATTGACTACAAACAATTTTTCAGTCATTTGTTGGGGTCCTGGTTGGGCTAATGGTTCAGGTTATGAGATTCCCTTGCCTCCTATTCTTCCAGGGCCTTGTGTTCAATCTTCTTGTAGTGAATGTGGGATATATCCTCAATCTGAGTCTTTGTGTTCTGGCTATGGTAACATTTGTAAGCCAAAGCCTTGTTGGCCTGAAATGCTGGTGCCGGCTCCACCTGCGGTGGTgccagcatcaccaccggggcctgcagcttctcggtcgaaggccttgactaaggggttgttggcatttgccattgttggatgcgtgggaggtgttgctgggatatgcactgcgatttattgtttgtggactggggtttgttttgggaagaagaaagttcacaattctgtgcagccgacaatcactagaggTGGCAGTGTAAATGGTGTGGGTGGTTCTAATAATAGCATTAGTCCTCCTTCAAGATCATCCACTATTAGGCGTCAAGGGTCACGGATAATGAGGCGTCAAAGGAGTGGAACATCATCCACAAAGCATCCTGAGAGGGCTGAGGAGTTCACTTTGGCTGAGCTTGTTGCTGCCACCAATAATTTCGCCCTTGAGAATAAGATTGGTGCTGGAAGCTATGGTGTTGTTTATAAAGGCAAACTCTTGGATGGTCGCGAGGTGGCAATCAAAAGGGGTGACACTAGTACCAAGATGAAGAAGTTTCAAGAGAAAGAGACTGCGTTTGAGTCAGAATTGGCCTTCTTATCCCGGTTACACCACAAGCACTTGGTTAGGTTGGTGGGGTTCTGTGAAGAGAAAGATGAGAGGCTGTTGGTGTATGAGTACATGAAGAATGGGGCATTGTATGATCATTTGCATGACAAGAACAATGTGGACAAGAGTAGTAGTGTCTTGAATTCTTGGAGAATGAGGATCAAAGTGGCGCTGGATGCTTCACGAGGGATTGAGTATCTCCATAATTATGCAGTTCCATCTATAATTCACAGAGATATCAAGTCTTCCAACATTCTCATTGATGCGACTTGGACGGCAAGAGTATCCGATTTTGGATTGTCATTGATGAGTCCAGAATCCAACCATGATTTCCGACCAATGAAGGCAGCGGGAACAGTTGGATACATTGATCCCGAATATTATGGTCTAAATGTACTGACAGCAAAGAGTGATGTCTATGGGCTTGGAGTGGTGCTGCTAGAACTATTAACAGGAAAGAGGGCTATATTCAAGAATGATGAAAATGGTGGCACCCCAGTGAGTGTGGTAGACTTTGCAGTGCCACTAATTATGGCGGGAGAGTTGGCAAAAATTTTGGACCCCAGGGTTGAACCACCAGAGATGAATGAAACAGAAGCAGTGGAGCTAGTGGGATACACTGCTATGCATTGTGTAAATTTGGAGGGGAAGGACAGACCAACAATGGCTGATATTGTGGCAAATTTGGAGCGTGCTTTGGCTCTCTGTGATAGTAGTCATGGCAGCATTTCCAGTGGTACAATCTCCATTGTATCTGACTGA | 2388 | 0.446 | MKNNKSPFSAATFTLFNATLLILSSLSPTHALGSAATLAATSSAVCGVVASEPTRRIACYRHGEVVAVAPNVSFSAISGGRSYFCGLRSGNYSLLCWDTLSGFQSKRLYNNGTVLLENLALGDSQVCATVVGAGTASCWRTNAAFESPSGSDRFDSISSGSGFSCGILKGSDRVRCWGVGSIARKMESEFGNMSLVSLVAGESHICGLNSSGYLVCRGSNDFGQIDVPEGGALEFSGLALGAEHTCAIRRSNGSVVCWGGRGLFEDDVTKTVSFEVIVSGSNFTCGLTTNNFSVICWGPGWANGSGYEIPLPPILPGPCVQSSCSECGIYPQSESLCSGYGNICKPKPCWPEMLVPAPPAVVPASPPGPAASRSKALTKGLLAFAIVGCVGGVAGICTAIYCLWTGVCFGKKKVHNSVQPTITRGGSVNGVGGSNNSISPPSRSSTIRRQGSRIMRRQRSGTSSTKHPERAEEFTLAELVAATNNFALENKIGAGSYGVVYKGKLLDGREVAIKRGDTSTKMKKFQEKETAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKNGALYDHLHDKNNVDKSSSVLNSWRMRIKVALDASRGIEYLHNYAVPSIIHRDIKSSNILIDATWTARVSDFGLSLMSPESNHDFRPMKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKNDENGGTPVSVVDFAVPLIMAGELAKILDPRVEPPEMNETEAVELVGYTAMHCVNLEGKDRPTMADIVANLERALALCDSSHGSISSGTISIVSD | 795 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma02g02425 | 795 | ProSiteProfiles | Protein kinase domain profile. | 486 | 775 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma02g02425 | 795 | MobiDBLite | consensus disorder prediction | 421 | 449 | - | - | |
Gma02g02425 | 795 | SUPERFAMILY | RCC1/BLIP-II | 154 | 303 | IPR009091 | - | |
Gma02g02425 | 795 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 617 | 629 | IPR008271 | GO:0004672|GO:0006468 | |
Gma02g02425 | 795 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 196 | 224 | - | - | |
Gma02g02425 | 795 | Gene3D | Transferase(Phosphotransferase) domain 1 | 567 | 784 | - | - | |
Gma02g02425 | 795 | ProSitePatterns | Protein kinases ATP-binding region signature. | 492 | 514 | IPR017441 | GO:0005524 | |
Gma02g02425 | 795 | PANTHER | SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN | 6 | 793 | - | - | |
Gma02g02425 | 795 | MobiDBLite | consensus disorder prediction | 421 | 470 | - | - | |
Gma02g02425 | 795 | SMART | serkin_6 | 486 | 775 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma02g02425 | 795 | Gene3D | Phosphorylase Kinase; domain 1 | 447 | 566 | - | - | |
Gma02g02425 | 795 | PANTHER | SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 | 6 | 793 | IPR044815 | GO:0004674 | |
Gma02g02425 | 795 | Pfam | Protein kinase domain | 488 | 769 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma02g02425 | 795 | Gene3D | - | 147 | 342 | IPR009091 | - | |
Gma02g02425 | 795 | SUPERFAMILY | Protein kinase-like (PK-like) | 464 | 771 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma02g02425 | Gma-Chr2 | 50337466 | 50340131 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma02g02425 | 9 | 795 | Receptor kinase-like Gene Family | AT3G55950 | 59.512 | 0.0 | 877 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CR4L | Gma02g02425 | Pkinase | 1.6e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma02g02425 | - | - | gmx:100782916 | 1455.65 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma14g00502 | 14 | 4795641 | 4798031 | Gma02g02425 | 02 | 50337466 | 50340131 | GST | |
Gma18g00248 | 18 | 2049389 | 2050411 | Gma02g02425 | 02 | 50337466 | 50340131 | PCT | |
Gma11g02328 | 11 | 38658855 | 38659985 | Gma02g02425 | 02 | 50337466 | 50340131 | PCT | |
Gma02g02425 | 02 | 50337466 | 50340131 | Gma18g00248 | 18 | 2049389 | 2050411 | PCT | |
Gma02g02425 | 02 | 50337466 | 50340131 | Gma11g02328 | 11 | 38658855 | 38659985 | PCT |