Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02425 ATGAAGAATAATAAATCACCCTTCTCCGCCGCCACCTTCACTCTCTTCAACGCCACCCTGTTAATCCTCTCTTCACTATCACCAACTCATGCCCTCGGTTCTGCCGCCACCCTCGCTGCCACCTCCTCCGCCGTATGCGGCGTGGTGGCATCGGAGCCGACGCGGCGCATTGCGTGCTACCGCCACGGCGAAGTCGTCGCCGTCGCCCCCAACGTTTCGTTCTCGGCGATCTCCGGCGGCCGGAGCTACTTCTGCGGCCTTCGCTCCGGCAACTACAGCCTCCTCTGCTGGGACACCCTCTCCGGCTTCCAAAGCAAGAGGCTTTACAACAATGGCACTGTTCTATTAGAGAATCTCGCCCTCGGAGACTCCCAGGTTTGCGCCACCGTGGTCGGCGCCGGAACGGCGTCGTGCTGGAGAACCAACGCCGCCTTCGAATCGCCATCTGGGTCGGACCGGTTTGATTCCATTTCATCTGGGTCGGGCTTCTCTTGCGGAATTTTGAAGGGTAGTGATCGGGTTCGGTGTTGGGGTGTTGGGTCCATAGCGAGAAAAATGGAGAGTGAGTTTGGGAACATGTCTTTGGTGAGTCTTGTGGCTGGGGAGTCACATATTTGTGGGTTGAATTCAAGTGGGTATTTGGTTTGTAGAGGAAGTAACGATTTTGGTCAAATTGATGTTCCTGAAGGAGGGGCTTTGGAGTTTTCTGGTTTGGCGCTTGGGGCTGAGCATACTTGTGCTATTCGGAGATCCAATGGTTCTGTCGTTTGTTGGGGTGGGAGAGGGTTGTTTGAGGATGATGTTACAAAAACTGTTTCTTTTGAGGTTATTGTTTCTGGGTCCAATTTTACTTGTGGATTGACTACAAACAATTTTTCAGTCATTTGTTGGGGTCCTGGTTGGGCTAATGGTTCAGGTTATGAGATTCCCTTGCCTCCTATTCTTCCAGGGCCTTGTGTTCAATCTTCTTGTAGTGAATGTGGGATATATCCTCAATCTGAGTCTTTGTGTTCTGGCTATGGTAACATTTGTAAGCCAAAGCCTTGTTGGCCTGAAATGCTGGTGCCGGCTCCACCTGCGGTGGTgccagcatcaccaccggggcctgcagcttctcggtcgaaggccttgactaaggggttgttggcatttgccattgttggatgcgtgggaggtgttgctgggatatgcactgcgatttattgtttgtggactggggtttgttttgggaagaagaaagttcacaattctgtgcagccgacaatcactagaggTGGCAGTGTAAATGGTGTGGGTGGTTCTAATAATAGCATTAGTCCTCCTTCAAGATCATCCACTATTAGGCGTCAAGGGTCACGGATAATGAGGCGTCAAAGGAGTGGAACATCATCCACAAAGCATCCTGAGAGGGCTGAGGAGTTCACTTTGGCTGAGCTTGTTGCTGCCACCAATAATTTCGCCCTTGAGAATAAGATTGGTGCTGGAAGCTATGGTGTTGTTTATAAAGGCAAACTCTTGGATGGTCGCGAGGTGGCAATCAAAAGGGGTGACACTAGTACCAAGATGAAGAAGTTTCAAGAGAAAGAGACTGCGTTTGAGTCAGAATTGGCCTTCTTATCCCGGTTACACCACAAGCACTTGGTTAGGTTGGTGGGGTTCTGTGAAGAGAAAGATGAGAGGCTGTTGGTGTATGAGTACATGAAGAATGGGGCATTGTATGATCATTTGCATGACAAGAACAATGTGGACAAGAGTAGTAGTGTCTTGAATTCTTGGAGAATGAGGATCAAAGTGGCGCTGGATGCTTCACGAGGGATTGAGTATCTCCATAATTATGCAGTTCCATCTATAATTCACAGAGATATCAAGTCTTCCAACATTCTCATTGATGCGACTTGGACGGCAAGAGTATCCGATTTTGGATTGTCATTGATGAGTCCAGAATCCAACCATGATTTCCGACCAATGAAGGCAGCGGGAACAGTTGGATACATTGATCCCGAATATTATGGTCTAAATGTACTGACAGCAAAGAGTGATGTCTATGGGCTTGGAGTGGTGCTGCTAGAACTATTAACAGGAAAGAGGGCTATATTCAAGAATGATGAAAATGGTGGCACCCCAGTGAGTGTGGTAGACTTTGCAGTGCCACTAATTATGGCGGGAGAGTTGGCAAAAATTTTGGACCCCAGGGTTGAACCACCAGAGATGAATGAAACAGAAGCAGTGGAGCTAGTGGGATACACTGCTATGCATTGTGTAAATTTGGAGGGGAAGGACAGACCAACAATGGCTGATATTGTGGCAAATTTGGAGCGTGCTTTGGCTCTCTGTGATAGTAGTCATGGCAGCATTTCCAGTGGTACAATCTCCATTGTATCTGACTGA 2388 0.446 MKNNKSPFSAATFTLFNATLLILSSLSPTHALGSAATLAATSSAVCGVVASEPTRRIACYRHGEVVAVAPNVSFSAISGGRSYFCGLRSGNYSLLCWDTLSGFQSKRLYNNGTVLLENLALGDSQVCATVVGAGTASCWRTNAAFESPSGSDRFDSISSGSGFSCGILKGSDRVRCWGVGSIARKMESEFGNMSLVSLVAGESHICGLNSSGYLVCRGSNDFGQIDVPEGGALEFSGLALGAEHTCAIRRSNGSVVCWGGRGLFEDDVTKTVSFEVIVSGSNFTCGLTTNNFSVICWGPGWANGSGYEIPLPPILPGPCVQSSCSECGIYPQSESLCSGYGNICKPKPCWPEMLVPAPPAVVPASPPGPAASRSKALTKGLLAFAIVGCVGGVAGICTAIYCLWTGVCFGKKKVHNSVQPTITRGGSVNGVGGSNNSISPPSRSSTIRRQGSRIMRRQRSGTSSTKHPERAEEFTLAELVAATNNFALENKIGAGSYGVVYKGKLLDGREVAIKRGDTSTKMKKFQEKETAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKNGALYDHLHDKNNVDKSSSVLNSWRMRIKVALDASRGIEYLHNYAVPSIIHRDIKSSNILIDATWTARVSDFGLSLMSPESNHDFRPMKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKNDENGGTPVSVVDFAVPLIMAGELAKILDPRVEPPEMNETEAVELVGYTAMHCVNLEGKDRPTMADIVANLERALALCDSSHGSISSGTISIVSD 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02425 795 ProSiteProfiles Protein kinase domain profile. 486 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02425 795 MobiDBLite consensus disorder prediction 421 449 - -
Gma02g02425 795 SUPERFAMILY RCC1/BLIP-II 154 303 IPR009091 -
Gma02g02425 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Gma02g02425 795 Pfam Regulator of chromosome condensation (RCC1) repeat 196 224 - -
Gma02g02425 795 Gene3D Transferase(Phosphotransferase) domain 1 567 784 - -
Gma02g02425 795 ProSitePatterns Protein kinases ATP-binding region signature. 492 514 IPR017441 GO:0005524
Gma02g02425 795 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 6 793 - -
Gma02g02425 795 MobiDBLite consensus disorder prediction 421 470 - -
Gma02g02425 795 SMART serkin_6 486 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02425 795 Gene3D Phosphorylase Kinase; domain 1 447 566 - -
Gma02g02425 795 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 6 793 IPR044815 GO:0004674
Gma02g02425 795 Pfam Protein kinase domain 488 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02425 795 Gene3D - 147 342 IPR009091 -
Gma02g02425 795 SUPERFAMILY Protein kinase-like (PK-like) 464 771 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02425 Gma-Chr2 50337466 50340131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02425 9 795 Receptor kinase-like Gene Family AT3G55950 59.512 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gma02g02425 Pkinase 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02425 - - gmx:100782916 1455.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00502 14 4795641 4798031 Gma02g02425 02 50337466 50340131 GST
Gma18g00248 18 2049389 2050411 Gma02g02425 02 50337466 50340131 PCT
Gma11g02328 11 38658855 38659985 Gma02g02425 02 50337466 50340131 PCT
Gma02g02425 02 50337466 50340131 Gma18g00248 18 2049389 2050411 PCT
Gma02g02425 02 50337466 50340131 Gma11g02328 11 38658855 38659985 PCT