Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02413 ATGGCTTCCTCATACCGTGACCGTACGTCGGAGTTCCGATTACTATCGGAGACTATGAAGAAGATCGGAGGTCCGGTTCAACCCGAAAATCCTCCTTCGACCTCTCGCGGCGGCGAGTCGTCGTATTCGAGATCCGAATTCAACCGAAAGGCCTCGCGAATCGGGTTGGGGATCCACGAGACCTCGCAGAAGATCGCGAGGCTCGCGCAGCTGGCGAGGAAATCGTCCATGTTCAACGATCCCGCCGTGGAGATTCAGGAGCTGACTGTTCTGATCAAGAACGAGATCACGACACTGAACTCGGCTCTCTCCGATTTGCAAACCATTCAGAACACGGATATGGCTGACGGCGGTTACTCGCAGGATACGATTGTGCATTCCACCGCGGTTTGTGATGACTTGAAGAGCAAACTCATGGGAGCCACAAAACACCTTCAAGATGTCTTAACTGCTAGGACAGAGAATATCAAGGCTCATGAGAACAGGAAGCAGATATTTTCCAAGAATGCATCAAGAGAGAACCCTTTCCAGCATCAGCCAAAGCCAGCTAATGAGCCGCCACCTTGGTCAAATTCATCGAATGCATCAGAGAGTTTGCAACAAGAATCAGCATTACCATCAAATGGAGCTCCTGTTGGCAATCAACTAAGACGAAGGTTGGCTGTGGACAACACTCCATCCCAGCAAATGGAAATGTCTATGGTACAGCAGGTTGTGCCTCGGCATGAAAACTATGCTCAAAGTCGAGCAACTGCTCTGCACAATGTGGAATCTACTATCACAGAACTAAGTGGGATTTTCTCACATTTGGCTACAATGGTTGCCCATCAAGGGGAGCTTGCTATCAGGATTGATGACAATATGGATGAGTCATTGGCAAATGTTGAAGGAGCTCACAGTTCTTTATTGAGGCATCTCAACCGAATATCATCAAATAGGTGGCTTCTAATAAAGATATTTGCCATTCTGATACTTTTCCTCACGATCTTCATATTCTTTGTCGCCTAA 1008 0.4772 MASSYRDRTSEFRLLSETMKKIGGPVQPENPPSTSRGGESSYSRSEFNRKASRIGLGIHETSQKIARLAQLARKSSMFNDPAVEIQELTVLIKNEITTLNSALSDLQTIQNTDMADGGYSQDTIVHSTAVCDDLKSKLMGATKHLQDVLTARTENIKAHENRKQIFSKNASRENPFQHQPKPANEPPPWSNSSNASESLQQESALPSNGAPVGNQLRRRLAVDNTPSQQMEMSMVQQVVPRHENYAQSRATALHNVESTITELSGIFSHLATMVAHQGELAIRIDDNMDESLANVEGAHSSLLRHLNRISSNRWLLIKIFAILILFLTIFIFFVA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02413 335 PANTHER SYNTAXIN 4 334 IPR045242 -
Gma02g02413 335 MobiDBLite consensus disorder prediction 167 212 - -
Gma02g02413 335 MobiDBLite consensus disorder prediction 188 210 - -
Gma02g02413 335 PANTHER SYNTAXIN-31 4 334 - -
Gma02g02413 335 CDD SNARE_syntaxin5 246 331 - -
Gma02g02413 335 MobiDBLite consensus disorder prediction 1 46 - -
Gma02g02413 335 SMART tSNARE_6 238 305 IPR000727 -
Gma02g02413 335 ProSitePatterns Syntaxin / epimorphin family signature. 249 288 IPR006012 GO:0005484|GO:0006886|GO:0016020
Gma02g02413 335 MobiDBLite consensus disorder prediction 28 46 - -
Gma02g02413 335 Pfam SNARE domain 280 331 IPR000727 -
Gma02g02413 335 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 243 305 IPR000727 -
Gma02g02413 335 SUPERFAMILY t-snare proteins 43 298 IPR010989 GO:0016020|GO:0016192
Gma02g02413 335 Gene3D - 40 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02413 Gma-Chr2 50197530 50201841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02413 1 335 SNARE and Associated Proteins AT5G05760 66.667 1.43e-150 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02413 K08490 - gmx:100777383 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00516 14 4934376 4939353 Gma02g02413 02 50197530 50201841 GST