Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02405 ATGGACGAGGGCTTGTCAGGCTTTTGCATTAGATCATCATCAGGAAGTGTCCGTGGCAAAAGTGGCACCAAGTGTGGGCGTTGGAATCCCACCACTGAACAGGTTAAACTTCTAACTGAACTCTTCAGATCAGGGCTCCGAACCCCAAGCACTGACCAGATTCAAAAGATCTCCACTCAGCTTAGCTTTTATGGCAAGATAGAGAGCAAGAATGTCTTCTATTGGTTTCAGAACCATAAGGCTCGGGAAAGACAGAAGAACCGTAAGCTCTCCTTTGATGATCACAAGGATCTCATTTGTAGACAAAATGCACCTTCTACACAAAGTCTTGCTGAGATGTACCAAGTTTCAAAGCCAGATAGGGTGATTGAGACTCTTCAACTCTTTCCCTTAAATTCCTTTGGTGAATCTGAACCAGAGAAGTTGAGGTTGCGTGCAAGTGAATGTCGGGATAATAATAATACAATGTTTTCATACACGATGGGTGAACAAATGGAGCACCCACCATTAGACCTGCGCTTGAGCTTTCTGTAA 534 0.4401 MDEGLSGFCIRSSSGSVRGKSGTKCGRWNPTTEQVKLLTELFRSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKNRKLSFDDHKDLICRQNAPSTQSLAEMYQVSKPDRVIETLQLFPLNSFGESEPEKLRLRASECRDNNNTMFSYTMGEQMEHPPLDLRLSFL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02405 177 PANTHER WUSCHEL-RELATED HOMEOBOX 7 1 166 - -
Gma02g02405 177 Pfam Homeodomain 25 85 IPR001356 GO:0003677
Gma02g02405 177 CDD homeodomain 27 87 IPR001356 GO:0003677
Gma02g02405 177 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 166 IPR044555 GO:0003700|GO:0099402
Gma02g02405 177 SUPERFAMILY Homeodomain-like 26 89 IPR009057 -
Gma02g02405 177 SMART HOX_1 23 90 IPR001356 GO:0003677
Gma02g02405 177 Gene3D - 24 92 - -
Gma02g02405 177 ProSiteProfiles 'Homeobox' domain profile. 21 86 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02405 Gma-Chr2 50128370 50129610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02405 11 177 Wox Gene Family AT3G11260 58.889 3.00e-63 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gma02g02405 Homeodomain 5.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02405 - - gmx:100820304 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02405 02 50128370 50129610 Gma02g02405 02 50128370 50129610 ECH
Gma18g00275 18 2285415 2286142 Gma02g02405 02 50128370 50129610 PCT
Gma11g02298 11 38357954 38358743 Gma02g02405 02 50128370 50129610 PCT
Gma02g02405 02 50128370 50129610 Gma18g00275 18 2285415 2286142 PCT
Gma02g02405 02 50128370 50129610 Gma11g02298 11 38357954 38358743 PCT