Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02403 ATGCCTTCTCCTGTACCCACCTTGCTCTCCAAATGCACCGTCTTCCCAGACCAAAAGTCCACTCTCGGAAACCTCAAACTCTCCGTTTCGGACCTTCCCATGTTGTCCTGCCACTACATCCAAAAGGGATGCCTCTTCACCCACCCCAATCTCCCACTCCACTCTTTGATCCCTCTCCTTAAATCCTCACTCTCTCGCACTCTTTCTCTCTTTCCACCTCTCGCCGGCCGTTTAATCACCGATTCCGACAGTTACGTCTATATCGCTTGCAACGACGCCGGCGTCGATTTCATTCACGCCAATGCCACTGCCCTTCGCATCTGTGACTTACTCTCCCAACTCGATGTTCCTGAATCTTTTAAGGAATTCTTCGCCTTCGATAGGAAAGTCAGCTACACCGGTCACTTCTCTCCGATTCTCGCCGTTCAGGTCACCGAACTCGCCGACGGCGTTTTCATCGGCTGCGCCGTCAATCACGCCGTCACCGACGGCACCTCCTTCTGGAATTTCTTCAACACCTTCGCTCAGCTCTCTAGAGGAGCCAGCAACTGCATCCGCAATATACCGGATTTCCACCGCGAGTCGGTTCTCATCTCCGACGCCGTTCTCCGTTTGCCGGAGGGCGGTCCTCAGGTCACGTTCGACGCCAACGCGCCTCTGCGCGAGAGAATATTCAGCTTCAGCCGCGAAGCGATTCAGAAACTCAAAGCCATAGCGAACAACCGCCGGTGGCCGGAAAACAACAACTTCGCCGGCGAGTTGTTACGGAAGAAAAGCAACGATAATCTACTAAAGGAGAACAAGGCGACGACAATTCTTGAGAACTGGTTCAAGGTGAATTCAAATTCGATTTCGAAACCGCAAACGGTGGAAATTTCGTCGTTTCAATCAGTGTGCGCGCTTCTGTGGCGCGGGGTGACGCGAGCGAGGAAATTTCCTTCGTCCAAAACGACGACGTTTAGAATGGCGGTTAACTGTCGCCACCGGTTAGAACCCAAACTGGAAGCGTATTACTTCGGGAACGCGATTCAGAGCGTGCCTACTTATGCTTCCGCGGGTGAGGTGTTATCCAGGGATCTACGGTGGTGCGCGGAGCAGTTGAACAAAAACGTGAAGGCGCACGACGACACTATGGTGCGGCGCTTCGTAGAGGATTGGGAGCGCAACCCGAGGTGCTTCCCACTTGGGAACCCTGACGGTGCATCCATCACAATGGGTAGTTCTCCGAGGTTTCCAATGTACGATAACAATTTCGGGTGGGGAAGACCACTCGCGGTGCGAAGCGGAAGAGCGAACAAATTTGACGGTAAGATCTCAGCGTTTCCCGGAAGAGATGGAACAGGGACCGTTGATTTGGAGGTTGTTCTAGCGCCCGAAACCATGGAGGCGCTAGAGTCTGATCCCGAATTCATGAAATATGCAACGTGTCAATTATGA 1437 0.5303 MPSPVPTLLSKCTVFPDQKSTLGNLKLSVSDLPMLSCHYIQKGCLFTHPNLPLHSLIPLLKSSLSRTLSLFPPLAGRLITDSDSYVYIACNDAGVDFIHANATALRICDLLSQLDVPESFKEFFAFDRKVSYTGHFSPILAVQVTELADGVFIGCAVNHAVTDGTSFWNFFNTFAQLSRGASNCIRNIPDFHRESVLISDAVLRLPEGGPQVTFDANAPLRERIFSFSREAIQKLKAIANNRRWPENNNFAGELLRKKSNDNLLKENKATTILENWFKVNSNSISKPQTVEISSFQSVCALLWRGVTRARKFPSSKTTTFRMAVNCRHRLEPKLEAYYFGNAIQSVPTYASAGEVLSRDLRWCAEQLNKNVKAHDDTMVRRFVEDWERNPRCFPLGNPDGASITMGSSPRFPMYDNNFGWGRPLAVRSGRANKFDGKISAFPGRDGTGTVDLEVVLAPETMEALESDPEFMKYATCQL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02403 478 Pfam Transferase family 7 471 - -
Gma02g02403 478 Gene3D - 219 469 IPR023213 -
Gma02g02403 478 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 474 - -
Gma02g02403 478 Gene3D - 7 204 IPR023213 -
Gma02g02403 478 PANTHER OS01G0854000 PROTEIN 7 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02403 Gma-Chr2 50115096 50116939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02403 59 465 Monolignol Biosynthesis Gene Families AT5G48930 27.098 3.47e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02403 - - gmx:100500612 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02403 02 50115096 50116939 Gma14g00524 14 5004622 5006067 ECH
Gma02g02403 02 50115096 50116939 Gma02g02403 02 50115096 50116939 ECH
Gma14g00524 14 5004622 5006067 Gma02g02403 02 50115096 50116939 GST
Gma18g00277 18 2299047 2305681 Gma02g02403 02 50115096 50116939 PCT
Gma02g02403 02 50115096 50116939 Gma11g02296 11 38338987 38340562 PCT