Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02396 ATGTCCTTGTCCGTCTCAGAGTCTCTCTTCACAACCTCACCGATCTGCCATTTCTCACTCTTTTATCAACAAGTGGTAGGTTTGGTGCACTTAGATCAAAAAGCCAGAGACATGTCTTTTATTGGTACTCAGCAAAAGTGCAAGGCTTGTGGCAAAACGGTTTATCCGGTTGATCAGTTATCTGCTTACCACAAAGCATGCTTCAAGTGCTCCCATTGCGAAGGAACCTTGAAGCTTAGCAACTATTCCTCCATGGAAAGTGTTCTTTACTGTAAGCCTCATAATGAGCAACTCTTCAAGGAGACAGGATCTTTCAAGAAGAACTTCCAGTCACCTTCTAAGCAAGCTGACAAAACAACTCCTGAGCTGGTAAAAATCTTGAATTTGTCTTTTTGA 396 0.4217 MSLSVSESLFTTSPICHFSLFYQQVVGLVHLDQKARDMSFIGTQQKCKACGKTVYPVDQLSAYHKACFKCSHCEGTLKLSNYSSMESVLYCKPHNEQLFKETGSFKKNFQSPSKQADKTTPELVKILNLSF 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02396 131 Gene3D Cysteine Rich Protein 41 107 - -
Gma02g02396 131 SMART lim_4 46 94 IPR001781 -
Gma02g02396 131 Pfam LIM domain 47 96 IPR001781 -
Gma02g02396 131 PANTHER LIM DOMAIN-CONTAINING PROTEIN WLIM2B 38 125 - -
Gma02g02396 131 ProSiteProfiles LIM domain profile. 45 101 IPR001781 -
Gma02g02396 131 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 69 109 - -
Gma02g02396 131 PANTHER OS06G0237300 PROTEIN 38 125 IPR045268 GO:0051015
Gma02g02396 131 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 39 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02396 Gma-Chr2 50022017 50023012 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma02g02396 LIM 5.8e-08 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02396 K09377 - gmx:100818168 186.037