Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02383 ATGGCAGAAAGAAGGAGAAGAAAGTGTTTGAATGACAGGCTTTCCATGCTAAGGTCAATAGTCCCTAAGATTAGCAAGATGGACAGGACCTCCATTCTTGGAGACACCATTGATTACATGAAAGAGCTTCTAGAAAGGATAGGCAAGTTGCAAGAAGAAGAAATGGAGGAGGGAACAAATCGGATAAACCTCTTGGGCATTTCTAAGGAGCTAAAGCCAAATGAAGTAATGGTAAGAAATTCCCCCAAGGTATGCTTAGACACAAGGATTAGCATCTGTTGTGCCACAAAGCCAGGATTACTACTGTCCACAGTGAACACCTTAGAAGCATTAGGCCTTGAGATTCACCAGTGTGTTATAAGCAGCTTCAATGATTTTTCAATGCAAGCATCTTGCTCAGAGGTAGCAGAGCAGAGAAATTGTATGAGCCAGGAAGAGATAAAGCAAGCACTATTCAGAAATGCAGGTTATGGTGAGGCTTCTGTGCAAAATGTTCCCTAA 501 0.4212 MAERRRRKCLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGKLQEEEMEEGTNRINLLGISKELKPNEVMVRNSPKVCLDTRISICCATKPGLLLSTVNTLEALGLEIHQCVISSFNDFSMQASCSEVAEQRNCMSQEEIKQALFRNAGYGEASVQNVP 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02383 166 SMART finulus 1 49 IPR011598 GO:0046983
Gma02g02383 166 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 43 IPR011598 GO:0046983
Gma02g02383 166 Pfam Helix-loop-helix DNA-binding domain 2 43 IPR011598 GO:0046983
Gma02g02383 166 Gene3D - 1 59 IPR036638 GO:0046983
Gma02g02383 166 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 159 - -
Gma02g02383 166 CDD ACT_UUR-ACR-like 88 129 - -
Gma02g02383 166 PANTHER TRANSCRIPTION FACTOR BHLH61-RELATED 1 159 - -
Gma02g02383 166 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 54 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02383 Gma-Chr2 49884942 49885836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02383 1 158 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 66.871 2.77e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma02g02383 HLH 1.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02383 - - gmx:106797762 312.383