Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02375 ATGAGCACACAGGGGCAAGTGATTATTGATGAGGCGGTTCTGGATGACATAATCCGGCGCTTAACGGAGGTCCGACTGGCCCGACCCGGCAAGCAGGTTCAGCTCTCCGAGTCTGAGATCAAGCAACTCTGCGTCGCTTCCAGAGACATCTTCATTAACCAGCCCAATTTGCTTGAACTCGAAGCCCCCATCAAGATTTGTGGTGACATTCATGGGCAGTACAGTGATTTGTTAAGGCTATTTGAGTATGGGGGTTTGCCTCCTACTGCGAATTATCTCTTTTTGGGGGACTACGTGGACCGTGGGAAGCAGAGCTTAGAAACCATATGTCTTTTGCTTGCGTATAAAATCAAATATCCAGAAAACTTTTTCCTGTTAAGGGGGAATCATGAGTGTGCTTCCATTAATAGGATTTATGGGTTTTATGATGAATGTAAGCGAAGGTTTAACGTGAGGCTTTGGAAAGCCTTTACCGACTGTTTTAACTTCCTTCCTGTGGCAGCCCTTATAGATGATAAAATATTGTGCATGCATGGTGGTCTTTCCCCTGAACTCACAAACTTGGATGAAATCAGGAATCTACCTCGTCCTACTGCGATTCCCGACACCGGCTTGCTTTGTGATTTGCTTTGGTCTGATCCTGGTAGGGATGTGAAGGGTTGGGGTATGAATGACAGAGGAGTGTCCTACACCTTTGGCCCTGATAAGGTCGCTGAGTTCTTGACAAAGCATGACTTGGACCTCATTTGTCGTGCTCATCAGGTTGTAGAGGATGGGTATGAATTCTTTGCTGATAGGCAACTTGTTACGATATTTTCAGCTCCAAACTATTGTGGTGAATTTGACAATGCTGTAATTAACCAAGATGTATTCGTGGAGCTAAATTAA 888 0.4505 MSTQGQVIIDEAVLDDIIRRLTEVRLARPGKQVQLSESEIKQLCVASRDIFINQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGLPPTANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNFLPVAALIDDKILCMHGGLSPELTNLDEIRNLPRPTAIPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVAEFLTKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAVINQDVFVELN 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02375 295 Gene3D - 5 293 IPR029052 -
Gma02g02375 295 Pfam Serine-threonine protein phosphatase N-terminal domain 14 61 IPR031675 -
Gma02g02375 295 Pfam Calcineurin-like phosphoesterase 63 255 IPR004843 GO:0016787
Gma02g02375 295 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 7 285 - -
Gma02g02375 295 PRINTS Serine/threonine phosphatase family signature 125 149 IPR006186 GO:0016787
Gma02g02375 295 PRINTS Serine/threonine phosphatase family signature 245 265 IPR006186 GO:0016787
Gma02g02375 295 PRINTS Serine/threonine phosphatase family signature 267 283 IPR006186 GO:0016787
Gma02g02375 295 PRINTS Serine/threonine phosphatase family signature 159 185 IPR006186 GO:0016787
Gma02g02375 295 PRINTS Serine/threonine phosphatase family signature 92 119 IPR006186 GO:0016787
Gma02g02375 295 PRINTS Serine/threonine phosphatase family signature 63 90 IPR006186 GO:0016787
Gma02g02375 295 PRINTS Serine/threonine phosphatase family signature 188 215 IPR006186 GO:0016787
Gma02g02375 295 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 285 - -
Gma02g02375 295 CDD MPP_PP1_PPKL 13 284 - -
Gma02g02375 295 ProSitePatterns Serine/threonine specific protein phosphatases signature. 126 131 IPR006186 GO:0016787
Gma02g02375 295 SUPERFAMILY Metallo-dependent phosphatases 23 285 IPR029052 -
Gma02g02375 295 SMART pp2a_7 35 295 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02375 Gma-Chr2 49816322 49819449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02375 64 251 Calmodulin-binding Proteins AT5G63870 31.839 1.81e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02375 K06269 - gmx:100811593 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02375 02 49816322 49819449 Gma14g00555 14 5344835 5348746 ECH
Gma02g02375 02 49816322 49819449 Gma02g02375 02 49816322 49819449 ECH
Gma14g00555 14 5344835 5348746 Gma02g02375 02 49816322 49819449 GST