Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02369 atgaaggcattgattctggttgggggatttggaacaaggctgaggccactgacactcagtttccctaagcctcttgttgattttgctaacaagcctatgattttgcatcagATAGAAGCCCTTAAGGCCATTGGAGTGACTGAGGTAGTGCTAGCCATCAATTACCAACCAGAGGTTATGTTGAATTTCTTGAAGGATTTTGAATCAAAGCTCGGCATCAAGATCACATGTTCTCAGGAAACTGAACCACTGGGAACAGCAGGTCCCCTGGCTCTTGCTAGGGATAAGCTGATAGATGATTCTGGAGAACCCTTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTATCCACTTAAAGAAATGATTGAATTCCATAAAAGCCATGGAGGAGAGGCTTCCATAATGGTAACAAAGGTTGATGAGCCATCAAAGTACGGCGTGGTTGTGATGGAAGAGAGCACAGGGCAGGTTGATAAATTTGTTGAAAAACCGAAGTTGTTTGTTGGTAACAAAATCAATGCTGGAATTTACCTGCTGAACCCCTCTGTTTTGGATCGAATTGAACTGAGGCCCACTTCTATTGAGAAAGAGGTGTTTCCAAAGATTGCTGCAGAGAAAAAGCTATTTGCAATGGTCCTGCCAGGATTTTGGATGGACATTGGACAACCGAGGGACTATATTTCTGGCCTGAGGCTTTACCTGGACTCATTGAAGAAGAAGTCATCATCTAAGTTGGCCAGTGGCTCTCAATTTGTAGGGAATGTCATTGTGGATGAGACAGCCAAAATTGGTGAGGGATGTCTCATTGGACCTGATGTTGCTATTGGTCCTGGCTGCATTATTGAGCAAGGTGTTAGACTCAAAAGCTGCACAATAATGCGTGGAGTCCGGGTTAAGAAGCATGCTTGTGTATCCAGCAGTATTGTTGGGTGGCATTCCACTGTTGGGCAATGGGCTCGAGTGGATAATATGACCATCCTTGGAGAAGATGTCCATGTATGTGATGAAATTTACAGCAATGGTGGTGTTGTTTTGCCACACAAGGAGATCAAGTCAAATATTCTGAAGCCGGAGATTGTCATGTGA 1086 0.3923 MKALILVGGFGTRLRPLTLSFPKPLVDFANKPMILHQIEALKAIGVTEVVLAINYQPEVMLNFLKDFESKLGIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKEMIEFHKSHGGEASIMVTKVDEPSKYGVVVMEESTGQVDKFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEVFPKIAAEKKLFAMVLPGFWMDIGQPRDYISGLRLYLDSLKKKSSSKLASGSQFVGNVIVDETAKIGEGCLIGPDVAIGPGCIIEQGVRLKSCTIMRGVRVKKHACVSSSIVGWHSTVGQWARVDNMTILGEDVHVCDEIYSNGGVVLPHKEIKSNILKPEIVM 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02369 361 Pfam Nucleotidyl transferase 2 229 IPR005835 GO:0009058|GO:0016779
Gma02g02369 361 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 233 IPR029044 -
Gma02g02369 361 Pfam Bacterial transferase hexapeptide (six repeats) 261 293 IPR001451 -
Gma02g02369 361 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 361 - -
Gma02g02369 361 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 312 IPR029044 -
Gma02g02369 361 Gene3D Hexapeptide repeat proteins 235 358 - -
Gma02g02369 361 CDD M1P_guanylylT_B_like_N 1 234 IPR045233 GO:0004475|GO:0005525|GO:0009298
Gma02g02369 361 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE FAMILY PROTEIN-RELATED 1 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02369 Gma-Chr2 49771196 49774209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02369 1 147 Eukaryotic Initiation Factors Gene Family AT4G18300 23.871 1.26e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02369 K00966 - gmx:100808375 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02369 02 49771196 49774209 Gma02g02369 02 49771196 49774209 ECH
Gma14g00562 14 5395016 5398297 Gma02g02369 02 49771196 49774209 GST
Gma18g00324 18 2683629 2689019 Gma02g02369 02 49771196 49774209 PCT
Gma11g02260 11 37916693 37918671 Gma02g02369 02 49771196 49774209 PCT
Gma02g02369 02 49771196 49774209 Gma18g00324 18 2683629 2689019 PCT
Gma02g02369 02 49771196 49774209 Gma11g02260 11 37916693 37918671 PCT