Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02364 ATGGCTGGAATTTGCTGTGGAGTTGTTGGAGAATCCGGAGAGACTTCTTCCTCTTCAATCGAACCCACCTCGCGCCCCTCCGCTCGCCGGAGTTTGGACCTTTTGCCTTTGAGATACATAGCTGCTGACGTGTCAGTCCCGGCGCCGGAGAACAGCCGGAAGCGCCGGAAGCTGGATCGGTGCGTTTCTTCCGCAAGGGAGTGCGAAAACGCGGTTCAGAGTTCCAAATCGAAGGTAGCTAAGGCTGTTCGGAATTGTTCTTCCAAGATTCTTACGTTGGACTCGACAAGTCCAACAGTTTACGAGGGGTGTCTGAGGTATGGGGTAACGTCCGTTTGTGGAAGGCGGAGAGACATGGAAGACGCCGTTTCGGTCCGTCCATCGTTTTGCCAGGAAAATTTATCTCAAGATGATAAGAAAGAGTTTCATTTCTTCGCTGTCTTCGACGGCCACGGATGCTCACATGTGGCGACTATGTGTAAGGAGAGGTTACACGAAATAGTGAAGGAAGAGATTCACAAAGCGAAGGAGAATTTGGAATGGGAATCAACGATGAAGAAGTGTTTCGCGCGCATGGACGAAGAGGTTCTCAGGTGGAGTCAGAACAACGAGACTCCAAGTTGCAGGTGCGAGCTTCAAACCCCGCACTGCGACGCCGTAGGCTCCACCGCTGTCATCGCCGTCGTCACGCCAGAGAAAATCATCGTCGCCAACTGCGGCGATTCACGCGCCGTGCTTTGTCGCAACAAGGTAGCCGTCCCACTCTCCGACGATCACAAGCCGGACCGGCCCGACGAGTTGCTTCGGATCCAAGCCGCGGGAGGGCGCGTGATATATTGGGACCGGCCTAGAGTGCTTGGAGTGTTGGCTATGTCCAGAGCCATAGGGGACAATTATCTGAAACCGTATGTAATTTCGGAACCGGAGGTAACGGTAACGGAGCGGAGTGACAAGGATGAGTGTTTGATACTAGGGAGCGATGGGCTTTGGGACACGGTGCAGAACGACACCGCATGTAAGGTGGTGCGGATGTGTCTGAACGCGCAGAAACCGGCGTCTCCGGTGAAGGAGATGGCGGTGGACTGCTCCGACAAGTCGTGCTCCGACGCCTCCATTCTTCTGACCAAATTGGCGTTGGTGAGGCAAAGCTCCGACAATGTTAGCGTGGTGGTGGTTGATTTGTGGAGAGACCAATCAATGGCAACAACAAAAGGAATTAATTAA 1224 0.5359 MAGICCGVVGESGETSSSSIEPTSRPSARRSLDLLPLRYIAADVSVPAPENSRKRRKLDRCVSSARECENAVQSSKSKVAKAVRNCSSKILTLDSTSPTVYEGCLRYGVTSVCGRRRDMEDAVSVRPSFCQENLSQDDKKEFHFFAVFDGHGCSHVATMCKERLHEIVKEEIHKAKENLEWESTMKKCFARMDEEVLRWSQNNETPSCRCELQTPHCDAVGSTAVIAVVTPEKIIVANCGDSRAVLCRNKVAVPLSDDHKPDRPDELLRIQAAGGRVIYWDRPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERSDKDECLILGSDGLWDTVQNDTACKVVRMCLNAQKPASPVKEMAVDCSDKSCSDASILLTKLALVRQSSDNVSVVVVDLWRDQSMATTKGIN 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02364 407 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 25 399 - -
Gma02g02364 407 Gene3D - 95 401 IPR036457 -
Gma02g02364 407 SUPERFAMILY PP2C-like 97 394 IPR036457 -
Gma02g02364 407 MobiDBLite consensus disorder prediction 9 28 - -
Gma02g02364 407 MobiDBLite consensus disorder prediction 11 26 - -
Gma02g02364 407 Pfam Protein phosphatase 2C 106 370 IPR001932 -
Gma02g02364 407 ProSitePatterns PPM-type phosphatase domain signature. 144 152 IPR000222 GO:0043169
Gma02g02364 407 ProSiteProfiles PPM-type phosphatase domain profile. 106 394 IPR001932 -
Gma02g02364 407 SMART PP2C_4 96 392 IPR001932 -
Gma02g02364 407 CDD PP2Cc 106 369 IPR001932 -
Gma02g02364 407 PANTHER ALPHABET, ISOFORM E-RELATED 25 399 - -
Gma02g02364 407 SMART PP2C_SIG_2 126 394 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02364 Gma-Chr2 49716591 49718694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02364 1 382 PP2C-type Phosphatase Gene Family AT3G11410 57.215 7.20e-139 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02364 K14497 - gmx:100807302 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02364 02 49716591 49718694 Gma14g00570 14 5455399 5457703 ECH
Gma02g02364 02 49716591 49718694 Gma02g02364 02 49716591 49718694 ECH
Gma14g00570 14 5455399 5457703 Gma02g02364 02 49716591 49718694 GST
Gma18g00330 18 2757841 2760096 Gma02g02364 02 49716591 49718694 PCT
Gma11g02250 11 37825143 37827221 Gma02g02364 02 49716591 49718694 PCT
Gma02g02364 02 49716591 49718694 Gma18g00330 18 2757841 2760096 PCT
Gma02g02364 02 49716591 49718694 Gma11g02250 11 37825143 37827221 PCT