Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02363 ATGGAGAGATCTCACTCTCAGACTCAGTACAGGATGTATGTGAAGAGAGAACAGCACTCACACCTTGGAGATTACTCATCGTGGGAAGAAAGGGCTTTTGCTGAAGACGCAGCAAGGATACTTGGTGGGAACATGTGGCCTCAAAGATCTTACTCTTGCACCTTTTGCACAAGAGACTTCAAATCTGCTCAAGCCCTTGGGGGTCACATGAATATCCACCAAAGGGACAGGGCTAGGCTCAAACAACAAAATCATCTTAGCCCTCATCACAAAAATCATCATTTCATCATCAAATCCTTATTAGGTAATAATAAACTTCATTTCTCATCTGCACCAGAAATCTCCACCCAGTTAGATTGTGGTCTTACTCATCATGCTTGTTATTCTTCTAGCCCTGCAACTACAATCACAACAACCAGACTCTTCTCTTGTATATCATCCACACAAGATCAAAATTGTGGCCACCATAATTTTTCACCTTCTTCTTCTAATTCTTGTTCTTCTTCAATTATCTTGGGACACGTAGGGTCTCCTAATTCAGAACAAGAAGGGGTAGTCAAAGCAAGGGACTATAAATTTAATGGCTTGGGTTGTAGTAATTATGTTGAAACAAGTTTGTCTGTTGGACTGACTTCAATGTTTGGCCAAAATTCATCATCACCAACAACCGTTCCTTGTGGGGACAGATCCAACAACAGTTGCAAGAGACTAAGGAGTAGCATTGTTTCTTCTCTGCCTCTCTTTCCCAAGCCATGTTCAAATGATAAAAGCTCGGCTTTTCAACCTGTGGTACATGGAACGGTTGAAGACTTGGATCTTGAACTCAGGCTAGGGAAACGTAACAGAAACTTAAGTAGTTAA 861 0.4135 MERSHSQTQYRMYVKREQHSHLGDYSSWEERAFAEDAARILGGNMWPQRSYSCTFCTRDFKSAQALGGHMNIHQRDRARLKQQNHLSPHHKNHHFIIKSLLGNNKLHFSSAPEISTQLDCGLTHHACYSSSPATTITTTRLFSCISSTQDQNCGHHNFSPSSSNSCSSSIILGHVGSPNSEQEGVVKARDYKFNGLGCSNYVETSLSVGLTSMFGQNSSSPTTVPCGDRSNNSCKRLRSSIVSSLPLFPKPCSNDKSSAFQPVVHGTVEDLDLELRLGKRNRNLSS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02363 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 51 78 IPR013087 -
Gma02g02363 286 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 284 - -
Gma02g02363 286 ProSitePatterns Zinc finger C2H2 type domain signature. 53 73 IPR013087 -
Gma02g02363 286 PANTHER OS07G0101800 PROTEIN 4 284 - -
Gma02g02363 286 SUPERFAMILY beta-beta-alpha zinc fingers 48 78 IPR036236 -
Gma02g02363 286 Gene3D Classic Zinc Finger 44 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02363 Gma-Chr2 49699357 49700217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02363 26 129 C2H2 Transcription Factor Family AT2G37740 49.524 4.82e-24 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma02g02363 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02363 - - gmx:102662367 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02363 02 49699357 49700217 Gma14g00571 14 5467698 5468531 ECH
Gma03g00573 03 16183570 16185249 Gma02g02363 02 49699357 49700217 ECH
Gma18g01704 18 47668065 47669949 Gma02g02363 02 49699357 49700217 ECH
Gma07g01266 07 16428585 16429977 Gma02g02363 02 49699357 49700217 ECH
Gma02g02363 02 49699357 49700217 Gma02g02363 02 49699357 49700217 ECH
Gma14g00571 14 5467698 5468531 Gma02g02363 02 49699357 49700217 GST
Gma18g00338 18 2841110 2842004 Gma02g02363 02 49699357 49700217 PCT
Gma11g02239 11 37715904 37716948 Gma02g02363 02 49699357 49700217 PCT