Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02361 ATGGCAAATCGTTGGTGGGCAGGTAACGTGCCGGTGAGGCCCAATGAACAAGACGACGGTGACAACAACCCTACTCCGACCAACAGTGGGAACAGTAACACCAACGTTAACGCGGTTACTGAGGACGATGCCAACACAAACGACGGCGAGGATCAGAATCTAAGTGCCGGGCGGCGGCCGCGTGGCAGGCCACCCGGGTCGAGAAACAAGCCGAAGCCACCAGTGGTGGTAACCAAGGAGAGTCCCAACGCGCTCCACAGCCACATCCTCGAAATCAGCGGTGGCAGCGACGTGGCGGAGTGCATTGCCACCTTCGCCACGCGCCGCCACCGCGGTGTCTCGGTCCTCAGCGGCAGTGGCGTAGTTACCAACGTCACGCTCCGGCAGCCGGCAGCCCCGGGAGGAGTCATCACCCTCCAGGGGAGGTTTGAGATTCTCTCCCTCTCCGGTGCGTTTCTGCCGGCGCCGTCGCCGCCGGAAGCCACCGGACTCACCGTGTACCTCGCCGGGGGGGAGGGACAGGTAGTCGGTGGAAGCGTGGTGGGGCCCCTTGTCGCCTCGGGGCCCGTGATGGTTGTTGCTGCTACTTTCGCTAATGCCACCTATGAAAGGTTGCCTTTGGAGGATGAACAAGGTGAAGAGGACATGCCAGATGTGAATGAAGGTGGGGGTGGTGTAGGAACACCACCACCACCTTCACAAGGTGAACAACAACAGCGCGATGTGAGGACATTGTTTGGTGGGCAATCTATGAGTCTTGATTCATGCTCTTCTGGAAGGATATACTCACCCACCGTTCAATTTAGTTGTGTCTGA 816 0.5931 MANRWWAGNVPVRPNEQDDGDNNPTPTNSGNSNTNVNAVTEDDANTNDGEDQNLSAGRRPRGRPPGSRNKPKPPVVVTKESPNALHSHILEISGGSDVAECIATFATRRHRGVSVLSGSGVVTNVTLRQPAAPGGVITLQGRFEILSLSGAFLPAPSPPEATGLTVYLAGGEGQVVGGSVVGPLVASGPVMVVAATFANATYERLPLEDEQGEEDMPDVNEGGGGVGTPPPPSQGEQQQRDVRTLFGGQSMSLDSCSSGRIYSPTVQFSCV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02361 271 ProSiteProfiles PPC domain profile profile. 82 220 IPR005175 -
Gma02g02361 271 SUPERFAMILY AF0104/ALDC/Ptd012-like 83 210 - -
Gma02g02361 271 MobiDBLite consensus disorder prediction 16 53 - -
Gma02g02361 271 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 6 236 IPR014476 GO:0003680
Gma02g02361 271 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 6 236 - -
Gma02g02361 271 CDD DUF296 88 169 IPR005175 -
Gma02g02361 271 MobiDBLite consensus disorder prediction 204 242 - -
Gma02g02361 271 Gene3D - 86 215 - -
Gma02g02361 271 Pfam Plants and Prokaryotes Conserved (PCC) domain 87 198 IPR005175 -
Gma02g02361 271 MobiDBLite consensus disorder prediction 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02361 Gma-Chr2 49669501 49673313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02361 58 211 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 76.623 8.16e-70 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02361 - - gmx:100811243 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02361 02 49669501 49673313 Gma02g02361 02 49669501 49673313 ECH