Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02360 ATGACAGGGTTTGGCTCATCATGTGGAGCATGCAAGTTCCTAAGGAGAAAATGCACGAGTGATTGTGTATTTGCTCCTTACTTTTCCTACGACCAAGCCTCAACCCATTTTGCAGCAGTGCATAAAATTTATGGTGCTAGTAATGTCTCCAAGCTACTGTCACATCTTCCAATCCAGAATAGAAGTGATGCTGCCGTCACCATATCTTACGAAGCCTTGGCTCGCATGCAGGATCCTATATATGGCTGTGTTGCTCATATCTATGCATTGCAGCATCAGGTTGCCAGCTTGCAAGAGGAGATAGATGCTCTTGGAAATCTAGTGGCAAATTCCTCAGTTAGTGTTGTCAATTGTGGCAGTGTCCAAGCAACAATTAACTCAAACAACGGAACACAGTTTAATATTTTGCAGCATGATGCTACAAGGACACAGTATTGTCAAAATAATCTAGCTAATTTTCTTTCACAAGAAGGAAGTGCCACAGTCTTCCAAAGTCTGATCAACTCACAGATGGATATAGAACTTCCTAATTGTACACAAGTGGAACACCCTTCATTTGGTGATTTCAACTCTAATCCGTTAGAACAGTTCCTATCTGGAATTGACCAAGAGATGTTCGTGAATCATCCATGGTTCAAGCATAATGCAGACATAAAGAACTAG 663 0.4133 MTGFGSSCGACKFLRRKCTSDCVFAPYFSYDQASTHFAAVHKIYGASNVSKLLSHLPIQNRSDAAVTISYEALARMQDPIYGCVAHIYALQHQVASLQEEIDALGNLVANSSVSVVNCGSVQATINSNNGTQFNILQHDATRTQYCQNNLANFLSQEGSATVFQSLINSQMDIELPNCTQVEHPSFGDFNSNPLEQFLSGIDQEMFVNHPWFKHNADIKN 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02360 220 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Gma02g02360 220 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 218 - -
Gma02g02360 220 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Gma02g02360 220 PANTHER LOB DOMAIN-CONTAINING PROTEIN 33 1 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02360 Gma-Chr2 49660860 49661784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02360 1 213 AS2 family AT5G06080 47.222 6.03e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma02g02360 LOB 4.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02360 K13945 - gmx:100809636 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02360 02 49660860 49661784 Gma02g02360 02 49660860 49661784 ECH