Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02338 ATGGGGTGCTGCTTAAGTGCCAGGATCAAAGCTGAGAGCCCTCCACGCAATGGTTTGAGTTCAAAGGATGGTAACAAGGAAGAAGATGGCTTAAGCAGCAAGGCCTCAACTCCCTCTGTTCCTCCAACTCCGCGGACGGAGGGAGAGATCTTGAAGTCCTCAAACATGAAGAGCTTCAACTTCAGTGAGCTAAAAACTGCTACAAGAAACTTTCGTCCAGATAGTGTGGTGGGTGAAGGCGGGTTTGGTTGTGTTTTTAAGGGGTGGATTGATGAACAGACACTTGCACCAGTTAGACCAGGGACTGGCATGGTCATTGCTGTGAAGAGGCTTAACCAAGAAGGTCTTCAGGGACACAGTGAATGGTTGACAGAAATCAATTACCTGGGGCAGCTGCGTCATCCTAATCTTGTGAAACTGATTGGTTACTGCTTAGAGGACGACCACCGGCTTTTGGTGTATGAGTTTTTGACCAAGGGAAGTTTGGATAATCATTTATTTAGGAGAGCTTCTTACTTTCAACCACTTTCTTGGAACATCCGTATGAAGGTTGCTCTTGATGCTGCTAAGGGTCTTGCATATCTTCATAGCGATGAAGCAAAAGTGATATATCGAGACTTCAAAGCTTCAAATATCTTACTTGATTCGaattacaatgcaaaactttctgattttggcttggcaaaggatggaccagctggtgataagagccatgtctctacaagggtaatgggcacatatggctatgctgctcctgaatatATGGCCACAGGTCACttgacaaagaagagtgatgtatacagcttcggggttgttctgctggaaatTATGTCTGGCAAACGAGCACTTGACAGCAACAGGCCAAGTGGGGAGCACAATTTAATTGAATGGGCCAAACCTTACCTCAGCAGCAAGCGCAGGATCTTCCAAGTCATGGATGCTCGCATAGAAGGCCAATACATGTTGCGCGAAGCAATGAAAGTAGCCACTCTTGCCATTCAATGCCTATCTGTGGAACCAAGATTTAGACCAAAGATGGATGAAGTGGTGAGAGCATTGGAGGAACTTCAGGATTCTGATGACAGAGTCGGAGGGGTGGGAAGCTCTCGTGATCAAACTACTAGAAGGAGTGGCCCTAGACAACATAGAGGTAGACAACATGAAACAACAAGGAAGTGA 1179 0.3986 MGCCLSARIKAESPPRNGLSSKDGNKEEDGLSSKASTPSVPPTPRTEGEILKSSNMKSFNFSELKTATRNFRPDSVVGEGGFGCVFKGWIDEQTLAPVRPGTGMVIAVKRLNQEGLQGHSEWLTEINYLGQLRHPNLVKLIGYCLEDDHRLLVYEFLTKGSLDNHLFRRASYFQPLSWNIRMKVALDAAKGLAYLHSDEAKVIYRDFKASNILLDSNYNAKLSDFGLAKDGPAGDKSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYSFGVVLLEIMSGKRALDSNRPSGEHNLIEWAKPYLSSKRRIFQVMDARIEGQYMLREAMKVATLAIQCLSVEPRFRPKMDEVVRALEELQDSDDRVGGVGSSRDQTTRRSGPRQHRGRQHETTRK 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02338 392 Gene3D Transferase(Phosphotransferase) domain 1 157 371 - -
Gma02g02338 392 MobiDBLite consensus disorder prediction 1 52 - -
Gma02g02338 392 ProSitePatterns Protein kinases ATP-binding region signature. 77 109 IPR017441 GO:0005524
Gma02g02338 392 ProSiteProfiles Protein kinase domain profile. 71 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02338 392 CDD STKc_IRAK 77 356 - -
Gma02g02338 392 SUPERFAMILY Protein kinase-like (PK-like) 48 355 IPR011009 -
Gma02g02338 392 Pfam Protein tyrosine and serine/threonine kinase 75 353 IPR001245 GO:0004672|GO:0006468
Gma02g02338 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Gma02g02338 392 PANTHER OS01G0588500 PROTEIN-RELATED 22 388 - -
Gma02g02338 392 PANTHER KINASE 1B 22 388 - -
Gma02g02338 392 MobiDBLite consensus disorder prediction 31 52 - -
Gma02g02338 392 MobiDBLite consensus disorder prediction 360 392 - -
Gma02g02338 392 Gene3D Phosphorylase Kinase; domain 1 46 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02338 Gma-Chr2 49462875 49468102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02338 15 353 Glycoside Hydrolase AT3G07070 47.414 1.22e-107 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma02g02338 PK_Tyr_Ser-Thr 7.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02338 - - gmx:100800735 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02338 02 49462875 49468102 Gma02g02338 02 49462875 49468102 ECH
Gma14g00590 14 5747394 5750424 Gma02g02338 02 49462875 49468102 GST
Gma18g00360 18 3136080 3140308 Gma02g02338 02 49462875 49468102 PCT
Gma11g02214 11 37400470 37404363 Gma02g02338 02 49462875 49468102 PCT
Gma02g02338 02 49462875 49468102 Gma18g00360 18 3136080 3140308 PCT
Gma02g02338 02 49462875 49468102 Gma11g02214 11 37400470 37404363 PCT