Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02334 ATGAGAAAACCTTGTTGTGACAAGGAAAACATCAATAAAGGTGCTTGGTCCAAGCAAGAAGACCAAAAGCTCATTGACTACATCCAAGTCCATGGTGAAGGCTGTTGGCGTTCCATTCCTAAAGCTGCTGGGCTGCATCGTTGTGGCAAAAGCTGTAGGATGAGATGGTTAAACTACTTACGACCAGGCATCAAACGTGGAATCTTTGCTGAAGATGAGGAAGACCTCATCATCAAACTCCATGCCCTCCTTGGTAACAGGTGGTCACTCATTGCTGGAAGGTTGCCTGGGAGGACAGACAATGAGGTGAAGAACTATTGGAATTCTCACATCCGAAGAAAACTAATAAAGATGGGAATTGATCCAAATAGCCATAAGCCACACCAAAGCTTTCCTCGTCCTCATGTTTCTTCTGCTGATCATCAGGGTGCATCAACATCTGAGTCCATCAACAACAACAAAGTCCCTTTCTTCAATTCCCGTGGTTCAGCTGCCACTGATCATCATAAGATTTCGTTCACTAAAGAAGAAACATCAATTATTTCATCACCCCCTTTGAATCTTGATCTTACAATTTCTTTACCTTCGCCTGTGGAAGAAAACAAAAATTCTGATCATGAGTCCGCCAAGACATGTGACGTGGATATAGATCTCAACTGTTAG 663 0.4299 MRKPCCDKENINKGAWSKQEDQKLIDYIQVHGEGCWRSIPKAAGLHRCGKSCRMRWLNYLRPGIKRGIFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIRRKLIKMGIDPNSHKPHQSFPRPHVSSADHQGASTSESINNNKVPFFNSRGSAATDHHKISFTKEETSIISSPPLNLDLTISLPSPVEENKNSDHESAKTCDVDIDLNC 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02334 220 MobiDBLite consensus disorder prediction 135 160 - -
Gma02g02334 220 PANTHER MYB TRANSCRIPTION FACTOR 2 214 - -
Gma02g02334 220 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
Gma02g02334 220 CDD SANT 71 111 IPR001005 -
Gma02g02334 220 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Gma02g02334 220 SMART sant 12 62 IPR001005 -
Gma02g02334 220 SMART sant 65 113 IPR001005 -
Gma02g02334 220 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 64 IPR017930 -
Gma02g02334 220 CDD SANT 15 60 IPR001005 -
Gma02g02334 220 Gene3D - 68 137 - -
Gma02g02334 220 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Gma02g02334 220 MobiDBLite consensus disorder prediction 121 161 - -
Gma02g02334 220 Gene3D - 13 65 - -
Gma02g02334 220 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 214 - -
Gma02g02334 220 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Gma02g02334 220 Pfam Myb-like DNA-binding domain 68 110 IPR001005 -
Gma02g02334 220 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02334 Gma-Chr2 49427668 49429314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02334 2 212 MYB Transcription Factor Family AT4G38620 53.097 4.04e-79 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma02g02334 Myb_DNA-binding 5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02334 K09422 - gmx:100306391 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00593 14 5780164 5781921 Gma02g02334 02 49427668 49429314 GST