Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02330 ATGGCAGCCAAATCTGAAGGCATCCAAGAAGAAGAAATGTCAAGTATGGAAGAGGGTGTTTCTTCCCCCAGCTCTTCCAGAACATGTTCCATGTCACATAACTGTTGTTCTAACGTTGTAACCCTCGCGCAGAAGGTGATGGCAGAAGTTATTGGCACATATTTTGTGGTATTTGCGGGTTGTGGCTCTGTGGCAGTGAATAAGATCTATGGCTCAGTCACATTTCCAGGGGTTTGTGTCACATGGGGACTGATTGTAATGGTCATGATTTACTCTCTTCGTCGTATCTCTGGAGCTCACTTCAATCCTGCAGTCACCATTACTTTAGCCATCTTTCGCCGGTTCTCATATAAAGAGGTGCCACTCTACATTTTTGCTCAGTTGCTGGGGTCGATCCTTGCTAGTGGCACATTAGCCCTAATGTTGGATGTAACGCCTAAAGCTTACTTTGGAACGGTACCAGTTGGATCCAATGGCCAGTCTTTAGTTGCTGAAATCATTATCACTTTTCTCTTGATGTTTGTTATATCTGCCGTTTCTACAGATGACAGAGCGGTGGGTGACTTTGCAGGTGTTGCAGTTGGGATGACTATAATGTTGAATGTCTTCATTGCCGGGCCAGTATCAGGAGCTTCCATGAACCCTGCAAGAAGTATTGGTCCCGCACTTATCAAACATGTTTACAAAGGGTTATGGGTATACGTAGTTGGTCCCGTTGTTGGATCCATTGCTGGAGCACTTGCCTATTATTTTCTTAGATCCATAGACAAGTCATCTTCAGAATAA 786 0.444 MAAKSEGIQEEEMSSMEEGVSSPSSSRTCSMSHNCCSNVVTLAQKVMAEVIGTYFVVFAGCGSVAVNKIYGSVTFPGVCVTWGLIVMVMIYSLRRISGAHFNPAVTITLAIFRRFSYKEVPLYIFAQLLGSILASGTLALMLDVTPKAYFGTVPVGSNGQSLVAEIIITFLLMFVISAVSTDDRAVGDFAGVAVGMTIMLNVFIAGPVSGASMNPARSIGPALIKHVYKGLWVYVVGPVVGSIAGALAYYFLRSIDKSSSE 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02330 261 PRINTS Major intrinsic protein family signature 44 63 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma02g02330 261 PRINTS Major intrinsic protein family signature 82 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma02g02330 261 PRINTS Major intrinsic protein family signature 119 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma02g02330 261 PRINTS Major intrinsic protein family signature 164 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma02g02330 261 PRINTS Major intrinsic protein family signature 195 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma02g02330 261 PRINTS Major intrinsic protein family signature 232 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma02g02330 261 ProSitePatterns MIP family signature. 100 108 IPR022357 -
Gma02g02330 261 SUPERFAMILY Aquaporin-like 39 255 IPR023271 -
Gma02g02330 261 MobiDBLite consensus disorder prediction 1 30 - -
Gma02g02330 261 Pfam Major intrinsic protein 40 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma02g02330 261 PANTHER AQUAPORIN NIP2-1 21 260 IPR034294 -
Gma02g02330 261 TIGRFAM MIP: MIP family channel proteins 48 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma02g02330 261 MobiDBLite consensus disorder prediction 15 30 - -
Gma02g02330 261 CDD MIP 44 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma02g02330 261 PANTHER AQUAPORIN NIP4-1-RELATED 21 260 - -
Gma02g02330 261 Gene3D Glycerol uptake facilitator protein. 3 261 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02330 Gma-Chr2 49400782 49403648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02330 1 261 Major Intrinsic Protein MIP AT5G37820 61.742 1.12e-114 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02330 K09874 - gmx:100803763 488.419