Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02329 ATGGAAGGTTTTTCACCGGAGGCGGAGGCGACAGCGGTGGCCGTACGGCGGGCGTTGGAGCTGCTGCAGCTGAACGACCCCGTTTTGAGGGTCCAAGCGGCGAGGGACATCCGGCGCCTGACCAAGACCTCGCAGCGGTGCCGCCGCCAGCTCCGGCAAGCCGTGGCGCCACTCGTGTCCATGCTCCGCGTTGACTCGTCCGAGTTCCACGAACCCGCGCTTCTCGCTCTGCTTAACCTCGCCGTACAAGACGAAAAGAACAAAATTAGCATTGTGGAAGCTGGTGCATTAGAGCCAATAATTAGTTTCCTCAAGTCACCAAATCCAAATCTGCAGGAGTATGCAACTGCATCTTTGCTCACTCTATCTGCCTCTCCAACCAACAAACCAATCATTAGTGCTTGTGGCACCATTCCTCTTCTTGTGAATATTCTAAGAGATGGAAGTCCTCAAGCTAAAGTTGATGCTGTGATGGCACTGTCCAATTTATCAACAACACAACCTGAAAACCTCAGCATCATTCTTGAAACAAATGCAATGCCTTTTATAGTTAGTCTTCTCAAAACCTGTAGAAAATCCTCAAAAATAGCTGAAAAATGCTCTGCTTTGATAGAATCCTTGGTGGGTTATGAAAAGGGAAGAATTTCCTTAACATCTGAAGAAGGTGGAGTTCTTGCAGTTGTGGAAGTTCTTGAAAATGGGACCCCCCAAAGTAGGGAACATGCTGTTGGGGCATTGCTGACTATGTGCCAAAGTGATAGATGTAAATATAGGGAACCAATTCTTAGAGAAGGTGTTATTCCAGGACTTCTTGAGCTTACAGTTCAAGGAACCCCCAAGTCTCAGCCAAAGGCACGTACCCTTTTGCAGTTACTAAGAGAGTCTCCATATTCAAGACCTAAAGCTGAACCTGACATTCTTGAGAACATAGTGTGTGACATCATATCACAGATTGATGGGGATGATCAATCTGGTAGAGCAAAGAAGATGCTGGCTGAGATGGTCCAAGTCAGCATGGAGCAGAGTTTGAGACATTTACAGCAAAGGGCTCTTGTATGTACCCCTAGTGAAATGCCTATTGCAAGTTGTGCTTCTGAAGTTTCTTCAAAATATTAG 1116 0.4677 MEGFSPEAEATAVAVRRALELLQLNDPVLRVQAARDIRRLTKTSQRCRRQLRQAVAPLVSMLRVDSSEFHEPALLALLNLAVQDEKNKISIVEAGALEPIISFLKSPNPNLQEYATASLLTLSASPTNKPIISACGTIPLLVNILRDGSPQAKVDAVMALSNLSTTQPENLSIILETNAMPFIVSLLKTCRKSSKIAEKCSALIESLVGYEKGRISLTSEEGGVLAVVEVLENGTPQSREHAVGALLTMCQSDRCKYREPILREGVIPGLLELTVQGTPKSQPKARTLLQLLRESPYSRPKAEPDILENIVCDIISQIDGDDQSGRAKKMLAEMVQVSMEQSLRHLQQRALVCTPSEMPIASCASEVSSKY 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02329 371 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 53 95 IPR000225 GO:0005515
Gma02g02329 371 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 136 178 IPR000225 GO:0005515
Gma02g02329 371 PANTHER U BOX DOMAIN-CONTAINING 6 353 - -
Gma02g02329 371 Pfam Armadillo/beta-catenin-like repeat 85 123 IPR000225 GO:0005515
Gma02g02329 371 SUPERFAMILY ARM repeat 15 317 IPR016024 -
Gma02g02329 371 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 95 132 IPR000225 GO:0005515
Gma02g02329 371 SMART arm_5 125 165 IPR000225 GO:0005515
Gma02g02329 371 SMART arm_5 44 82 IPR000225 GO:0005515
Gma02g02329 371 SMART arm_5 167 209 IPR000225 GO:0005515
Gma02g02329 371 SMART arm_5 84 124 IPR000225 GO:0005515
Gma02g02329 371 SMART arm_5 210 251 IPR000225 GO:0005515
Gma02g02329 371 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 6 353 - -
Gma02g02329 371 Gene3D - 3 354 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02329 Gma-Chr2 49395139 49398856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02329 15 293 U-box Gene Family AT2G23140 33.096 3.36e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02329 - - gmx:100798093 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00598 14 5821922 5826250 Gma02g02329 02 49395139 49398856 GST
Gma18g00367 18 3195760 3199913 Gma02g02329 02 49395139 49398856 PCT
Gma11g02206 11 37295987 37299811 Gma02g02329 02 49395139 49398856 PCT
Gma02g02329 02 49395139 49398856 Gma18g00367 18 3195760 3199913 PCT
Gma02g02329 02 49395139 49398856 Gma11g02206 11 37295987 37299811 PCT