Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02326 ATGATGAGTTTGTGTTCCTCCAAAGGAACCTGTTCTGGTGACACCAATGCACACGTTTCCTCTTCTACTGTTGGAAATTACTCTTCTGACAAAAAAAGGCACAACAACAAATTCATAACCTTTTTGAGAAAAACCATGTGGGAGTATGCTTTGGCATGTGTTGGTGTTGTTCCTTGTGGCGGCAATAACGACCTTAACGGTCAAAGGAAGACAACTTTGGAGCACAACAAGGCGTGGTTGCTGGCGGATTCTGGAGCCGAATTGGCGAGTGCTGACCCTCGATCGGTTCACTCGTCTTTCAGGTTCAGCTTCTGTTCTCAGGTTGAGGTTGAGTCCTTCAACATGAGCTATTCTGCTTCTGCTGCCGCTGCTGCAACCTTTTTGATGGTGAATTTGGACTATGAGTCTCAAGTGAGGGAGTTGAAATGGAGGAGAATACAGTCACTGGAGAAAAGCCTGTCTCCGGTGGCCAACACTTTGATCAGGTTCAGCTATGATGAAATTCTGTCTGCTACTCGCAATTTCTCCAAAGAGAGAGTGTTGGGGAGAGGTGCCTTGAGCTGTGTATTTAGAGGAAGAGTTGGGATTTGGAGGACTGCTGTTGCTATTAAAAGGTTGGATAAGGAAGACAAGGAGTGTGCCAAGGCGTTTTGTAGAGAATTGATGATTGCTAGTTCTCTGAATGACACAAATGTTGTTCCTCTTGTGGGGTTTTGTATTGACTCGGAGGAGGGTTTGTTTTTGGTGTACAAGTATGTGTCAGGAGGAAGCTTAGAGCATCACTTACATGGGAGGAAGAAGGGTGTGAAGGGTAGTTCACCACTTCCATGGTCTGtgaggtacgaagttgcaattgggattgcagaagctgtggcttatctgcataatggaacagaaagatgtgttgttcatagagacataaagccttcaaacattctgcttTCCTCTAAGAAGATTCCCAAGTTATGTGATTTTGGGCTAGCTTCATGGACTTCTGCACCTTCAGTCCCTTTCCTTTGCAAAACTGTGAAAGGAACATTTGGTTATTTGGCTCCTGAGTATTTTGAACATGGGAAAGTATCAGATAAGACTGATGTTTATGCTTTGGGAGTTGTTCTATTGGAGCTCTTAACTGGCCGCAATCCAATTGAAGCAAAACGACCCCCTGGAGAGGAAAACTTAGTAGTATGGGTGAGTTAA 1200 0.4075 MMSLCSSKGTCSGDTNAHVSSSTVGNYSSDKKRHNNKFITFLRKTMWEYALACVGVVPCGGNNDLNGQRKTTLEHNKAWLLADSGAELASADPRSVHSSFRFSFCSQVEVESFNMSYSASAAAAATFLMVNLDYESQVRELKWRRIQSLEKSLSPVANTLIRFSYDEILSATRNFSKERVLGRGALSCVFRGRVGIWRTAVAIKRLDKEDKECAKAFCRELMIASSLNDTNVVPLVGFCIDSEEGLFLVYKYVSGGSLEHHLHGRKKGVKGSSPLPWSVRYEVAIGIAEAVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLASWTSAPSVPFLCKTVKGTFGYLAPEYFEHGKVSDKTDVYALGVVLLELLTGRNPIEAKRPPGEENLVVWVS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02326 399 SUPERFAMILY Protein kinase-like (PK-like) 155 390 IPR011009 -
Gma02g02326 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672|GO:0006468
Gma02g02326 399 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 24 398 - -
Gma02g02326 399 Gene3D Transferase(Phosphotransferase) domain 1 253 399 - -
Gma02g02326 399 ProSiteProfiles Protein kinase domain profile. 175 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02326 399 Gene3D Phosphorylase Kinase; domain 1 135 252 - -
Gma02g02326 399 Pfam Protein kinase domain 175 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02326 399 PANTHER OS01G0750732 PROTEIN 24 398 - -
Gma02g02326 399 MobiDBLite consensus disorder prediction 1 29 - -
Gma02g02326 399 SMART serkin_6 175 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02326 Gma-Chr2 49347791 49350670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02326 163 398 Trihelix Transcription Factor Family AT1G70460 42.373 7.30e-57 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gma02g02326 Pkinase 5.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02326 - - gmx:100802176 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02105 14 52135124 52138246 Gma02g02326 02 49347791 49350670 GST
Gma18g00370 18 3241807 3245066 Gma02g02326 02 49347791 49350670 PCT
Gma11g02201 11 37231886 37235490 Gma02g02326 02 49347791 49350670 PCT
Gma02g02326 02 49347791 49350670 Gma18g00370 18 3241807 3245066 PCT
Gma02g02326 02 49347791 49350670 Gma11g02201 11 37231886 37235490 PCT