Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02300 ATGTCTTTCGCTCTCATCGAAGCCTGCAAGAAGCGTAAACGGTTGCCGAAGTTTTTCAGGTTCAACTCGTTCGGCGACCCTGGTGTTGTTCCAATTGCACGTTCGGGTCCCTTCCGCGATAACGTTCGCGTTTTCCTTCAAGAAGCTGGCGATCTCGAAGACTACACTGTCTCCGGGAACCCCCTCTGGTGCATTCTTCTCATCCACGACAACTCGTACGCTATGGCTCCTCTTTACACCATCGAAGAACACGTCGACCACTCTTCGCACCCCTTCTGCGATCACTGCCGCTGCGTAGGTTGGAGTGGACATTTTGTATCAAAGAGAAGGTATCATTTTATAATCCCCATGGACAATGGGTGGCATAAACCCTTAGATGAAGATTCAATAGACAATGAGAAGCATCTGATGCATGGAGTGATTCATTGCAATGGGTATGGTCATTTGCTTTGTGTCAATGGCATTGAAGAAGGCTCCAAGGTTCTTAGTGGCAGAGAGATCATGGATCTTTGGGATAGGATATGCACAAACCTCCGAGTGAGGAAGATTGCAGTGGAAGATGTTTCTTGTAAGAGGTCTATGGATCTTCGCTTACTTCATGGAGTTGCTTATGGACACTCCTGGTTTGGTAGGTGGGGCTATAGGTTTTGCCGTGGAAGCTTTGGAGTGACAGAGCGAGAATACAATGAAGCAATGACAACGCTTGGTTCCTTGGGGCTTGACGTGATTGTAAAAGATTTGAGCAAGACAAAGACAAAGTACAAGGCAGAAATCAAGCAAATTATTCGGTGCTATAGAGATATGAGTGAGACTCATATTATCTCACTCAGGGATCTTCTAAGGTTTATGCTCACTGTCAAGTCTTCTCGTGCTCCTGTGCCTAAGATAACAGACACTTATTCTGCTGCTGCTGATTCTACTTCTTCAGCATTAACCTCAAGAAATTCAACCAAACACACACTTCCAAACAGATCAAATTCCATGAAGGATAAATCTGTGAGGTACAAGAAGTTCAGCAATGCAGTGACTAGCATAGATAGCAGGTGGCCCACAAGGAGACTAGAGTTTGCAGCTCAAGTGATTGTGGATGCACTGAAAGAGAACAAGGCTGTGAAACCAGGCTCAGGTGGGATGACAAGGCAAGATGTGAGAGATGCAGCTAGGATACACATTGGTGACACAGGCTTACTCGATTATGTGCTTAAATCACTCAACAATGTGATTGTTGGAAACTATGTTGTTCGTCGCATGGTGAATCCAACAACTAGAATCTTAGAGTACACTATTCATGATCTTGGCAAGGGGTTAAAAGCCCCTGAAGTGGAGACTGAAGTGATGGCTCATGTAGATCAACAAGTAGAAGAGTCATCTTGGAAGCCTGGTAATGATGTATACTGTGATGCATTGTTTTTGTACAAGAATGTGCTATTGAGTTACCCTGATTCAGAAGCAGTGGACACAGCAGTTCAGACAATTCTAGACAGCAGATACTTTGTGAAGGAGTGGCCAGTAAGGGATGAAATAAAGGAGCAGGTATTGACATTCATTTGCCGCTTGCAACCAAATTTTGTGGACAAAAAACATGAGCTGAAAGGTGTAGCATGTGGTGAGATTGTAGTGGTTCCACTGCATGCAACAGTTGGTGACTTGAAGAGAGCTTCAGAGGCTGCTCTGAGGGACACTTACTGCATTGCAGAGAGTCTTATAGTGACAGACATCAAAGAACTCATGGATGTGAGTGATGAGGAAGTATTGTTTGGATTAATCCAGTCTGGTGTGGAACTTTGTGTGAGGGGAATTGCAATTGATTTGTTGACCCCTTTGAAGTATGAGGGTGGATCTGAATCTGACAACTGGAAGGTGAGGTGTGAGTGTGGAGCTCAAGATGATGATGGGGAGAGAATGGTGGCTTGTGACATTTGTGAAGTATGGCAGCACACTCGGTGCTGTGGCATTGATGATTCTGAGACAGTGCCACCACTGTTTGTGTGCACTGGTTGCTGTGACTCAGTACTAGTACCTTCTTCAAGGACTGAATCAACAGTCTTTGGTGTGGATTCTGCCGATTCTTTTCTCATTTCAGAAGACTCTACCCTTTTACTAGGATACGAGTATGGATACTAA 2124 0.4468 MSFALIEACKKRKRLPKFFRFNSFGDPGVVPIARSGPFRDNVRVFLQEAGDLEDYTVSGNPLWCILLIHDNSYAMAPLYTIEEHVDHSSHPFCDHCRCVGWSGHFVSKRRYHFIIPMDNGWHKPLDEDSIDNEKHLMHGVIHCNGYGHLLCVNGIEEGSKVLSGREIMDLWDRICTNLRVRKIAVEDVSCKRSMDLRLLHGVAYGHSWFGRWGYRFCRGSFGVTEREYNEAMTTLGSLGLDVIVKDLSKTKTKYKAEIKQIIRCYRDMSETHIISLRDLLRFMLTVKSSRAPVPKITDTYSAAADSTSSALTSRNSTKHTLPNRSNSMKDKSVRYKKFSNAVTSIDSRWPTRRLEFAAQVIVDALKENKAVKPGSGGMTRQDVRDAARIHIGDTGLLDYVLKSLNNVIVGNYVVRRMVNPTTRILEYTIHDLGKGLKAPEVETEVMAHVDQQVEESSWKPGNDVYCDALFLYKNVLLSYPDSEAVDTAVQTILDSRYFVKEWPVRDEIKEQVLTFICRLQPNFVDKKHELKGVACGEIVVVPLHATVGDLKRASEAALRDTYCIAESLIVTDIKELMDVSDEEVLFGLIQSGVELCVRGIAIDLLTPLKYEGGSESDNWKVRCECGAQDDDGERMVACDICEVWQHTRCCGIDDSETVPPLFVCTGCCDSVLVPSSRTESTVFGVDSADSFLISEDSTLLLGYEYGY 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02300 707 MobiDBLite consensus disorder prediction 307 329 - -
Gma02g02300 707 SMART PHD_3 622 668 IPR001965 -
Gma02g02300 707 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 10 675 - -
Gma02g02300 707 MobiDBLite consensus disorder prediction 307 328 - -
Gma02g02300 707 SUPERFAMILY FYVE/PHD zinc finger 610 673 IPR011011 -
Gma02g02300 707 ProSitePatterns Zinc finger PHD-type signature. 623 667 IPR019786 -
Gma02g02300 707 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 609 671 IPR013083 -
Gma02g02300 707 CDD PHD_MMD1_like 623 667 - -
Gma02g02300 707 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 10 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02300 Gma-Chr2 49057808 49060909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02300 10 676 PHD Transcription Factor Family AT5G22260 34.270 1.70e-120 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02300 - - gmx:100797388 1441.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02070 14 51838854 51842031 Gma02g02300 02 49057808 49060909 GST