Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02282 ATGGTTCTGTCCAAAACCGCCTCGGAGACAGACGTCTCTGTTCATTCCACCTTCGCCTCTCGCTATGTCCGCACCTCCCTTCCCAGGTTCAAGATGGCGGAGGAATCGATCCCGAAGGAAGCCGCGTACCAGATCATACACGACGAGCTGATGCTGGACGGGAATCCGAGGCTGAACCTGGCGTCGTTTGTGACGACGTGGATGGAACCTGAGTGTGACAAACTCATCATGGCTGCCATTAACAAAAATTACGTCGACATGGATGAGTACCCTGTCACCACTGAGCTCCAGAACCGGTGTGTTAACATGATAGCTCACCTTTTCAATGCACCACTAGAAGAGTCAGAAACTGCAGTTGGTGTTGGCACGGTTGGCTCATCAGAGGCCATAATGTTGGCTGGGTTGGCATTCAAAAGGAGATGGCAGAATAGAAGGAAACTGGAAGGGAAGCCTTATGACAATCCCAACATTGTCACTGGTGCCAATGTTCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAGCTGAAAGAGGTGAAGCTGCGTGATGGATACTATGTAATGGACCCTGAAAAAGCAGTGGAAATGGTGGATGAGAACACCATTTGTGTTGCTGCTATCCTTGGTTCCACTCTGAATGGAGAGTTTGAAGATGTCAAACTCTTAAATGATCTCCTGGTGGAAAAGAATAAGGAAACTGGATGGGACACTCCAATTCATGTGGATGCTGCCAGTGGGGGATTCATTGCACCTTTTCTTTATCCAGAGCTTGAATGGGACTTTCGGTTGCCACTAGTGAAGAGCATCAATGTTAGTGGACACAAATATGGTTTAGTCTATGCTGGAATTGGTTGGGTCATTTGGAGAAGCAAGGAAGACCTTCCTGAGGAACTCATTTTCCACATTAACTATCTAGGAGCTGATCAACCCACCTTCACCCTCAACTTCTCCAAAGGTTCTAGCCAAGTTATTGCTCAGTACTACCAACTAATTCGACTGGGTTATGAGGGATATAAAATGGTGATGGAAAACTGCAATGACAACATGGCAGTGCTTAAGGAAGGACTGGAGAAAACAGGAAGGTTTGAGATTATATCCAAAGACATTGGTGTTCCATTGGTGGCCTTCACATTGAAGGACCACACCCACTTCAATGAATTCCAAATCTCTGACATGCTGAGGCGCTATGGTTGGATAGTGCCAGCATACACAATGCCCCCAGATGCACAACATGTGACAGTGCTTCGTGTTGTGATTAGGGAGGATTTTTCTCGCACCCTCGCGGAGCGTCTAGTGATTGATGTCACCAAAGTTGTGCACGAGCTGGATCTCCTTCCTGCTAGGGTGATCAGCACCAACACCATAATGGTTACAGGAGAAGCAGGTGAAGAAAATGACGAAAAAGTGCTGTTTGCCAAGAAGAGTGAAATAGAAACACAAAGGGAAATCACTAAAGCTTGGAAGAAGTTTGTGATGGACAGGAAGAAGATGAATGGTGTTTGTTAG 1512 0.4656 MVLSKTASETDVSVHSTFASRYVRTSLPRFKMAEESIPKEAAYQIIHDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEESETAVGVGTVGSSEAIMLAGLAFKRRWQNRRKLEGKPYDNPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYKMVMENCNDNMAVLKEGLEKTGRFEIISKDIGVPLVAFTLKDHTHFNEFQISDMLRRYGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVIDVTKVVHELDLLPARVISTNTIMVTGEAGEENDEKVLFAKKSEIETQREITKAWKKFVMDRKKMNGVC 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02282 503 Gene3D - 361 448 - -
Gma02g02282 503 Gene3D - 1 65 - -
Gma02g02282 503 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Gma02g02282 503 PANTHER GLUTAMATE DECARBOXYLASE 1 503 - -
Gma02g02282 503 PANTHER GLUTAMATE DECARBOXYLASE 1 503 IPR010107 GO:0004351|GO:0006536|GO:0030170
Gma02g02282 503 Gene3D - 66 360 IPR015421 GO:0003824
Gma02g02282 503 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Gma02g02282 503 Pfam Pyridoxal-dependent decarboxylase conserved domain 39 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02282 Gma-Chr2 48894805 48901601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02282 1 503 Calmodulin-binding Proteins AT5G17330 84.722 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02282 K01580 - gmx:100787167 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00411 18 3748756 3759371 Gma02g02282 02 48894805 48901601 PCT
Gma11g02158 11 36621468 36630614 Gma02g02282 02 48894805 48901601 PCT
Gma02g02282 02 48894805 48901601 Gma18g00411 18 3748756 3759371 PCT
Gma02g02282 02 48894805 48901601 Gma11g02158 11 36621468 36630614 PCT