Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02278 ATGGCGATACAAAGCCAAAATGCATTTACTAGATCACGGGGTGGTCTTCCAATTGGAGATGGAATATCTTTGAATTCTGGTGTGCATCCTGTTGCAGATATTCCACTACATGATCAGTTTTCTTGTGGAAATGACTATGCCTTGAAGGTAAGGAAACCATATACTATCACAAAGCAAAGAGAGAGGTGGACAGATGAAGAACATAAGAAGTTCCTTGAAGCCTTAAAGTTATATGGCAGGGCCTGGCGACGGATTGAAGAACATGTTGGTACAAAGACTGCTGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTCTAAGATTCTTCGAGAGTCTAGTAGAAACAGTACAACCTTGGAGGAGTCAATTGAAATCCCCCCTCCACGACCGAAACGGAAGCCAATTCATCCTTACCCTCGTAAACTAGTTGAGATTCCAAAGACAGAAATTTCCAACTCAGAACTCCCACTGAGGTCGAATTCTCTTAAGCCATCAGACTTTGGTCAAGAAAACAATTCTCCCAAGTCAGTGTTATCTACAGTTGTTTCAGAAACCCTTGGTTCCTCCGATTCAGATACACCTACTAGATGTTTGTCACCAACCTCATCCATTAGTGATGTCCCCACAAACAGATTTCCACTCGCTGAGCCCAAAACATCATTTGAGGAAGAAGGGTCTCCACCAAGTTCAGCTCATGATAAGCAACCTCCTGTGAAACTGGAGTTTTTTCACAAAGAAAGTGTTTCTACCAAGGACGATGCAACAGAAGAATCATCTGGTCGTACTCTCAAACTTTTTGGGACCACTCTACTGATAACAGATACATGCAAACCTTCTTCACCAACAATGGAGCCATGGAAACCAACACCTGCGGCTGCAATGTATCTTATGCAACTTCAGAATGGATGTTCAGATATTACAGAAGGTCCTGCTTCTATTGTTCCTTGGTGGAGTCTTCCCCACAATACACCATTCATGCCACTGCACAAGGAGCCAAAAGGGAATCATATATACTCCAACCTTGGAGAGTTTGTACATAAAGAAGTTCAAAAGGAAGGATCATGGACTGGTTCAAACACTAGTTCAATTAATGATGGAGATAACATTGAAAAATCAGATGATCAAGCCAAGAGTCATGTGCATTGCTTTAGCAAAAGTGAAATATCAAGTATATCTGAGCTAAGGGTAAGGCCTAAAACATGTGGAAAAGGGTTTGTACCATGTAAAAGGCGCATGGCAGAGAGAGAAAGCAAGTACTCATCAATATGTTACGAGGAGAGGGAAGAGCAAGGTATTAAGCTTTCCTTGTAG 1311 0.4172 MAIQSQNAFTRSRGGLPIGDGISLNSGVHPVADIPLHDQFSCGNDYALKVRKPYTITKQRERWTDEEHKKFLEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFSKILRESSRNSTTLEESIEIPPPRPKRKPIHPYPRKLVEIPKTEISNSELPLRSNSLKPSDFGQENNSPKSVLSTVVSETLGSSDSDTPTRCLSPTSSISDVPTNRFPLAEPKTSFEEEGSPPSSAHDKQPPVKLEFFHKESVSTKDDATEESSGRTLKLFGTTLLITDTCKPSSPTMEPWKPTPAAAMYLMQLQNGCSDITEGPASIVPWWSLPHNTPFMPLHKEPKGNHIYSNLGEFVHKEVQKEGSWTGSNTSSINDGDNIEKSDDQAKSHVHCFSKSEISSISELRVRPKTCGKGFVPCKRRMAERESKYSSICYEEREEQGIKLSL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02278 436 MobiDBLite consensus disorder prediction 116 238 - -
Gma02g02278 436 SMART sant 59 107 IPR001005 -
Gma02g02278 436 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 58 107 IPR006447 GO:0003677
Gma02g02278 436 MobiDBLite consensus disorder prediction 352 375 - -
Gma02g02278 436 PANTHER PROTEIN REVEILLE 7-RELATED 40 423 - -
Gma02g02278 436 PANTHER SWI/SNF COMPLEX-RELATED 40 423 - -
Gma02g02278 436 SUPERFAMILY Homeodomain-like 54 108 IPR009057 -
Gma02g02278 436 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 109 IPR017930 -
Gma02g02278 436 MobiDBLite consensus disorder prediction 352 366 - -
Gma02g02278 436 MobiDBLite consensus disorder prediction 125 143 - -
Gma02g02278 436 Gene3D - 62 108 - -
Gma02g02278 436 ProSiteProfiles Myb-like domain profile. 55 105 IPR001005 -
Gma02g02278 436 MobiDBLite consensus disorder prediction 152 209 - -
Gma02g02278 436 CDD SANT 62 105 IPR001005 -
Gma02g02278 436 Pfam Myb-like DNA-binding domain 60 103 IPR001005 -
Gma02g02278 436 ProSiteProfiles SANT domain profile. 58 109 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02278 Gma-Chr2 48842998 48846781 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma02g02278 Myb_DNA-binding 1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02278 - - gmx:100785040 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02054 14 51644803 51648476 Gma02g02278 02 48842998 48846781 GST