Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02277 ATGTTGGCACTCACACTATCCATTCTCATAATCGCTACACTCTCTTCTTCGCCACTAGTCACCTCTCACTACTCCTCTTCCACTCTCGAGTCCCCTCCTTCTTCTCTAGAAGCCTCCCCGACCTTCTCCGAATGGCGATCCGCGCGCGCCACCTACTACGTCGCGGCGGATCCCCGCGACGCGGTGGGCGGCGCGTGCGGCTACGGCGACCTGGTTAAGGGCGGCTACGGCATGGCCACGGTGGGGCTCAGCGAGGCCCTGTTCGAGCGCGGCCAGATCTGTGGCGCGTGCTTCGAGCTCCGCTGCGTCGAGGACATGCGCTGGTGCATCCCCGGCACCTCCATCATCGTCACCGCCACCAACTTCTGCGCCCCCAACTACGGCTTCACCTCCGACGGCGGCGGACACTGTAACCCTCCCAACAAGCATTTCGTTCTCCCCATCGAAGCTTTTGAGAAGATCGCCATTTGGAAAGCCGGCAACATGCCCGTGCAGTATCGCAGGATAAAGTGTAGGAAGGAAGGAGGGATGCGATTTACTGTTACTGGTTCTGGAATCTTCATTTCAGTGCTGATCAGTAATGTTGCTGGCCACGGAGACATAGGGGAGGTGAAGGTTAAAGGCTCCAGAACCGGTTGGCTTTCAATGGGTCGGAATTGGGGGCAAAACTGGCATGTAAATGCGTTGCTGCAAAACCAGCCTCTTTCGTTCGAGGTTAAAGCTAGTGATGGCAAAACGGTTACTTCTTACAATGTTGCTCCCAAGGATTGGACCTTTGGACAAACCTTTGAAGGCAAGCAATTTGAGACTTGA 813 0.5597 MLALTLSILIIATLSSSPLVTSHYSSSTLESPPSSLEASPTFSEWRSARATYYVAADPRDAVGGACGYGDLVKGGYGMATVGLSEALFERGQICGACFELRCVEDMRWCIPGTSIIVTATNFCAPNYGFTSDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGMRFTVTGSGIFISVLISNVAGHGDIGEVKVKGSRTGWLSMGRNWGQNWHVNALLQNQPLSFEVKASDGKTVTSYNVAPKDWTFGQTFEGKQFET 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02277 270 PANTHER EXPANSIN-A13 24 269 - -
Gma02g02277 270 SMART dpbb_1 80 166 IPR007112 -
Gma02g02277 270 SUPERFAMILY PHL pollen allergen 173 265 IPR036749 -
Gma02g02277 270 Pfam Lytic transglycolase 81 166 IPR009009 -
Gma02g02277 270 Gene3D - 176 268 IPR036749 -
Gma02g02277 270 Gene3D - 30 172 IPR036908 -
Gma02g02277 270 PRINTS Expansin signature 75 89 IPR002963 GO:0009664
Gma02g02277 270 PRINTS Expansin signature 102 113 IPR002963 GO:0009664
Gma02g02277 270 PRINTS Expansin signature 115 125 IPR002963 GO:0009664
Gma02g02277 270 PRINTS Expansin signature 134 151 IPR002963 GO:0009664
Gma02g02277 270 PRINTS Expansin signature 151 164 IPR002963 GO:0009664
Gma02g02277 270 PRINTS Expansin signature 175 187 IPR002963 GO:0009664
Gma02g02277 270 PRINTS Expansin signature 187 208 IPR002963 GO:0009664
Gma02g02277 270 PRINTS Expansin signature 222 243 IPR002963 GO:0009664
Gma02g02277 270 PRINTS Expansin signature 251 267 IPR002963 GO:0009664
Gma02g02277 270 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 63 176 IPR007112 -
Gma02g02277 270 PANTHER EXPANSIN-A15 24 269 IPR002963 GO:0009664
Gma02g02277 270 PRINTS Expansin/Lol pI family signature 44 59 IPR007118 GO:0005576
Gma02g02277 270 PRINTS Expansin/Lol pI family signature 62 80 IPR007118 GO:0005576
Gma02g02277 270 PRINTS Expansin/Lol pI family signature 84 102 IPR007118 GO:0005576
Gma02g02277 270 PRINTS Expansin/Lol pI family signature 159 175 IPR007118 GO:0005576
Gma02g02277 270 PRINTS Expansin/Lol pI family signature 213 227 IPR007118 GO:0005576
Gma02g02277 270 PRINTS Expansin/Lol pI family signature 251 265 IPR007118 GO:0005576
Gma02g02277 270 SUPERFAMILY Barwin-like endoglucanases 40 194 IPR036908 -
Gma02g02277 270 Pfam Expansin C-terminal domain 177 254 IPR007117 -
Gma02g02277 270 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 186 265 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02277 Gma-Chr2 48837601 48839332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02277 44 270 Expansin Gene Family AT3G03220 85.463 1.69e-150 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02277 - - gmx:100784516 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02053 14 51637689 51639958 Gma02g02277 02 48837601 48839332 GST
Gma18g00417 18 3842939 3845947 Gma02g02277 02 48837601 48839332 PCT
Gma11g02149 11 36515961 36516539 Gma02g02277 02 48837601 48839332 PCT
Gma02g02277 02 48837601 48839332 Gma18g00417 18 3842939 3845947 PCT
Gma02g02277 02 48837601 48839332 Gma11g02149 11 36515961 36516539 PCT