Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02273 ATGGCACCTGTTTTGCCTCCCGGTTTCAGATTCCACCCTACAGACGAAGAACTTGTTGCTTATTACCTTAAAAGAAAGATCAATGGCCGAAAGATTGAGTTAGAGATCATACCTGAAGTTGATCTCTATAAGTGTGAACCATGGGACTTGCCAGGGAAATCATTGTTACCAGGAAAGGATTTGGAGTGGTATTTCTATAGCCCTCGAGATAGGAAGTACCCAAATGGATCAAGAACAAACCGTGCAACCAAATCTGGATATTGGAAGGCCACGGGGAAGGATAGAAAAGTAAATTCCCAGGCTCGGGCTGTGGGCATGAAGAAAACCCTAGTTTACTATCGAGGAAGAGCACCCCATGGCTCTCGTACAAATTGGGTTATGCATGAATACCGTCTTGATGAGAGAGAATGCGAAACCAATTCAGGCTTGCAGGATTCATATGCTCTTTGCCGTGTGGTCAAGAAGACTGCAGTGATTCCTCCAAAAGTTGGGGAGCATCACTATGTTAATGTTCCCAATGCCAACCAAATTACAAGTGATCATTCATCAAGTATTGAAATATACCCTGAAGGAAGGGGCGAAGATTTAGATAGCACAAATTATTTTATGCCGGTGGATGCTTGCTCACCACACAACATGGGAAACGAGACTTCTCTCACAATCAATAGTGGGATCATGACAAGGGATCATGAGAAATGGTCACACTTCTCATCACAAGACCCTTTATTTAGTCTTCCAACTTCTTCATTTTCCAAATTTGGAGCCATAGCATACCCTCCATCTAAGGTGGATATAGCACTAGAGTATGCAAGGATGCAGCATAGGTTTGTTTTGCCTCCTTTGGAGGTGGATGACTTCCCTCAAGTTGGAATCTCAGAGCTGAAAATGACACAAGCCTCCGGTTCCATGCAAGGAAGCAGAACTGAAACAGATATCTTGCAGGAAATTCTTTCAGTTGCTCAAGTTTCTCAGGAATTAATAAATCAATCCAACTACTCGCAGGAATGGGGTGGCAATAATGATAATTATGCTCCTCGTGAAGATGATTTTACCTTCATGGTTGGCACTAATTACAATCATTCAAATCATGGAATGAGCTCAATGAGGTATGCTGACAAAACATGGGAAGATGCAAACACAAGGACAATAGAGATCGGAGATGTGGATGAAGAATTTAAGGCAGAGAGGATGGTGGAGAATTTAAGATGGGTTGGAATGTCAAGTGAAGATTTACAAAAGATGGAAGAACAAAAGATTGTCCCAATAGAAGATATTTCAAGCTTCCAAACTAATGAGGTGCAAGAATCTGAGCAACATAGCAACAAGGAGCACAATGACGACACTGAAATCAACGATTTCTCATTGGGCTTCATCAATGACAATGATGGCCCTAACGAGAACTTCATAGAAGATGGTAACATAGATGATTATTCAAGTTCTCCTAGCTTTGAGGTCGTTGAGGAAATAAAGGTCAATCATGGAATGTTAGTTTCGACTCATCAAGTAGTGGAGACATTCTTTCACCAAATAGTTCCTTCACAAACTGTTCAAGTTCACCTCATCAATTCAGTGATGGCACATAACAATCATTATGTAGAGAATGCAGAGGCAATGCTAATGATAATGGAGAACAAAGGGTCTTCATTAAGGAATAAGGTTAAGGCCTATGTGATGGGGAAGCTTATAAAACCTTCAAAGACAATTGCAAGTGCAATTGTATTCGTCTTTGCACTTGTGTTGATGCATTGTGTTTATTTGAAGGAAGAAGTGGAAATTTGGAATGAGTCAAATAATGAGGTTAATTGGTTTGTTGGTGTCAAAAGTCATGAGAAAGAATTAAGTGCAGTCTTGAAGAAAATAGGCATTTTTCTCACCATATCTTTGGCTTTTTGTACCATGTGGGCTAGCCAGAATATGGTAGTTAACCCTTGA 1932 0.4053 MAPVLPPGFRFHPTDEELVAYYLKRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFYSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQARAVGMKKTLVYYRGRAPHGSRTNWVMHEYRLDERECETNSGLQDSYALCRVVKKTAVIPPKVGEHHYVNVPNANQITSDHSSSIEIYPEGRGEDLDSTNYFMPVDACSPHNMGNETSLTINSGIMTRDHEKWSHFSSQDPLFSLPTSSFSKFGAIAYPPSKVDIALEYARMQHRFVLPPLEVDDFPQVGISELKMTQASGSMQGSRTETDILQEILSVAQVSQELINQSNYSQEWGGNNDNYAPREDDFTFMVGTNYNHSNHGMSSMRYADKTWEDANTRTIEIGDVDEEFKAERMVENLRWVGMSSEDLQKMEEQKIVPIEDISSFQTNEVQESEQHSNKEHNDDTEINDFSLGFINDNDGPNENFIEDGNIDDYSSSPSFEVVEEIKVNHGMLVSTHQVVETFFHQIVPSQTVQVHLINSVMAHNNHYVENAEAMLMIMENKGSSLRNKVKAYVMGKLIKPSKTIASAIVFVFALVLMHCVYLKEEVEIWNESNNEVNWFVGVKSHEKELSAVLKKIGIFLTISLAFCTMWASQNMVVNP 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02273 643 MobiDBLite consensus disorder prediction 430 451 - -
Gma02g02273 643 ProSiteProfiles NAC domain profile. 5 155 IPR003441 GO:0003677|GO:0006355
Gma02g02273 643 Coils Coil 532 552 - -
Gma02g02273 643 Gene3D NAC domain 14 158 IPR036093 GO:0003677|GO:0006355
Gma02g02273 643 SUPERFAMILY NAC domain 3 155 IPR036093 GO:0003677|GO:0006355
Gma02g02273 643 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 395 - -
Gma02g02273 643 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 395 - -
Gma02g02273 643 MobiDBLite consensus disorder prediction 436 450 - -
Gma02g02273 643 Pfam No apical meristem (NAM) protein 6 132 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02273 Gma-Chr2 48813546 48817679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02273 1 585 NAC Transcription Factor Family AT1G65910 46.633 3.08e-160 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma02g02273 NAM 3.6e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02273 - - gmx:100792628 1316.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02049 14 51611099 51615838 Gma02g02273 02 48813546 48817679 GST