Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02249 ATGCTCGCTGCTGCTGCTTCAGCTTCTCGGCACCTTCTTCAGCGTGATGCCACCAGCATCGGTGCTTGCAGTGGCAGTGGCAATAGAGTTCGTTCTCTTTTGACTGCTTCTGCCATCACCACAACCTACCCAATTCGCTTTAGAAAATGTTATGGAATCAGTTTCAATAATCCAAAGCACAGAACGTGCCCAAGTTTGTTTTTAGCTGTAAAGGGGTTCCTCTCTGATTCATCAAATTCTAATTCCCCACATGGCAGGGTTACCAGACCTTACTTACCAAACCCTAGTTCTACTGTGGATGGGCGAGCATTGTTCTCCACTTCAACTAAAACTGATGATGGAAGTCAGAGCCAGAAGGCTGCTGCTTCTTCCACCATTGGTAAATCATCACCACCACCGCCCCCTGGTGGGCAAGCTGCTGATGTGAAGATCCTTCGCACGCTTGCCAGTTACTTGTGGATGAAAGATAATCTCGAGTTTCGGGTTCGGATTGTTGCTGCATTGGGTTTGCTTGTTGGGGCTAAGATTTTGAATGTTCAGGTGCCTTTCCTGTTCAAGCTTGCAGTTGATTCGTTGACGGCTGCCACAGGGAGTGTGGGTGCTCTTGCTTCGAATTCAAGTGGGTTGGCTTTTTTTGCAACCCCTGTGGCAGTTTTGATTGGATATGGGATTGCTCGGTCAGGAGCTTCTGCTTTCAATGAACTGCGGACTGCTGTATTTGCTAAGGTTGCACTGCGAACAATTCGATTAGTATCAAGGAAGGTCTTCTCACATTTGCATGACCTTGACCTTCGGTATCATCTAAGCCGAGAAACTGGTGCATTAAGTAGAATAATTGATCGTGGTAGTCGTGGAATAAATTTCATTCTCTCCTCTATGGTGTTCAATGTAGTACCCACCATATTAGAGATATCTATGGTAGCAGGTATATTGGCCTACAAATTTGGAGCTCCCTTTGCGCTGATTACTTCCTTATCTGTTGCTGCCTATGTTACTTTTACACTGACTATCACACAGTGGAGGACTAAATTCAGGAAAGCCATGAATAAGGCAGATAATGATGCTAGTACAAGGGTTATTGATTCACTTATTAATTATGAGACTGTGAAATATTTTAATAATGAAGTTTATGAAGCTGATAACTATGACAAGTACCTAAAGAGGTATGAGGATGCTGCTCTGAAAACCCAACGCAGTCTTGCTTTGTTGAACTTTGGTCAAAATGTTATATTTAGTACCGCTCTTTCATCAGCAATGGTGCTTTGCTCTCATGGAATCATGGATGGCACGATGACTGTTGGTGATTTGGTAATGGTGAATGGACTACTCTTCCAACTATCTCTTCCACTCAATTTCCTTGGTAGTGTTTATCGTGAGACTATTCAGAGTCTAGTTGACATGAAGTCCATGTTTCAGCTACTTGAGGAAAGAGCAGACATTAGGGATAAAGAAAATGCAAAGCCTCTGAGATTTAACGGGGGAAGAATCCAATTTGAGAATGTACATTTTAGTTACCTCACAGAGAGAAAGATACTAGATGGAATATCATTTGTTGTGCCAGCTGGTAAAAGTGTTGCAATTGTTGGGACTAGTGGAAGTGGAAAATCAACCATTCTTAGATTGCTGTTCAGATTCTTCGATCCTCATTTTGGAAGTATAAAGATAGATGATCAAGATATTCGGGAGGTAACCTTTGAGAGTTTGCGGAAGTCCATTGGTGTTGTTCCACAAGATACTGTACTTTTCAATGATACAATATTTCATAACATTCACTATGGTCGGCTTTCTGCAACGGAAGAGGAGGTCTATGAAGCTGCTCAGCAAGCAGCAATTCATAACACTATCATGAAGTTTCCCGATAAATATTCAACTGTTGTGGGAGAGCGAGGGCTAAAGTTAAGTGGTGGTGAGAAGCAACGTGTTGCCCTGGCTCGTGCATTCTTAAAAGCACCTGCAATACTATTGTGCGATGAAGCTACTAGTGCTCTTGACAGCACAACAGAAGCAGAAATTTTAAGTGCGTTAAATTCAGTAGCAAATAATCGGACTTCCATATTCATTGCTCACAGGCTTACCACTGCAATGCAGTGTGACGAGATCATTGTTTTGGAAAATGGGAAGGTGATTGAGCAAGGACCCCATGAAGTGCTCTTGTCAAAAGCAGGAAGATATGCACAGCTGTGGGGACAGCAAAATAACAGTGTTGATGCAGTTGATACAGCCATCAAGCTGGGAGCATAA 2241 0.4279 MLAAAASASRHLLQRDATSIGACSGSGNRVRSLLTASAITTTYPIRFRKCYGISFNNPKHRTCPSLFLAVKGFLSDSSNSNSPHGRVTRPYLPNPSSTVDGRALFSTSTKTDDGSQSQKAAASSTIGKSSPPPPPGGQAADVKILRTLASYLWMKDNLEFRVRIVAALGLLVGAKILNVQVPFLFKLAVDSLTAATGSVGALASNSSGLAFFATPVAVLIGYGIARSGASAFNELRTAVFAKVALRTIRLVSRKVFSHLHDLDLRYHLSRETGALSRIIDRGSRGINFILSSMVFNVVPTILEISMVAGILAYKFGAPFALITSLSVAAYVTFTLTITQWRTKFRKAMNKADNDASTRVIDSLINYETVKYFNNEVYEADNYDKYLKRYEDAALKTQRSLALLNFGQNVIFSTALSSAMVLCSHGIMDGTMTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKSMFQLLEERADIRDKENAKPLRFNGGRIQFENVHFSYLTERKILDGISFVVPAGKSVAIVGTSGSGKSTILRLLFRFFDPHFGSIKIDDQDIREVTFESLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATEEEVYEAAQQAAIHNTIMKFPDKYSTVVGERGLKLSGGEKQRVALARAFLKAPAILLCDEATSALDSTTEAEILSALNSVANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGPHEVLLSKAGRYAQLWGQQNNSVDAVDTAIKLGA 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02249 746 Pfam ABC transporter transmembrane region 167 449 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma02g02249 746 Gene3D - 488 743 IPR027417 -
Gma02g02249 746 Gene3D ABC transporter type 1, transmembrane domain 151 486 IPR036640 GO:0005524|GO:0016021
Gma02g02249 746 SUPERFAMILY ABC transporter transmembrane region 148 475 IPR036640 GO:0005524|GO:0016021
Gma02g02249 746 CDD ABCC_ATM1_transporter 496 731 - -
Gma02g02249 746 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 165 462 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma02g02249 746 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 496 730 IPR003439 GO:0005524
Gma02g02249 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 731 IPR027417 -
Gma02g02249 746 MobiDBLite consensus disorder prediction 77 127 - -
Gma02g02249 746 CDD ABC_6TM_ATM1_ABCB7 167 470 - -
Gma02g02249 746 PANTHER ABC TRANSPORTER OF THE MITOCHONDRION 1-RELATED 132 737 - -
Gma02g02249 746 MobiDBLite consensus disorder prediction 77 139 - -
Gma02g02249 746 Pfam ABC transporter 512 661 IPR003439 GO:0005524
Gma02g02249 746 ProSitePatterns ABC transporters family signature. 633 647 IPR017871 GO:0005524
Gma02g02249 746 SMART AAA_5 521 707 IPR003593 -
Gma02g02249 746 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 132 737 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02249 Gma-Chr2 48584564 48601267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02249 334 732 Calmodulin-binding Proteins AT2G36910 36.585 2.94e-64 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02249 K05662 - gmx:100787870 1410.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02028 14 51373967 51392504 Gma02g02249 02 48584564 48601267 GST