Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02240 ATGATGTATCTTTCAAAGGGTTGTAAGTGTGAAGAAGTTGTTCTGTGCTTGTGCTTCTGCTGCTATTTCCTATTGGCTGCTGGTCTGATCACTGACCCCACTGAAGTTGACGCATTAAGAATCATAAAGGGAAGTCTGATAGATATTAATGGAAATTTGAGCAACTGGAATCGTGGAGACCCATGTACATCTAACTGGACAGGGGTTATGTGCTCCAATACAACATTAGTCGATGGCTATCTACATGTTCTACAATTGCATCTACTGAACTTGAACTTGTCTGGAACTTTGGCACCGGAGATTGGCCGCTTAGCTTATCTAGAAGTGTTGGACTTTATGTGGAATAACATAACTGGGAGTATACCGAAGGAAATTGGCTTTATCAATCCTTTGAGACTCTTACTCCTGAATGGAAATCAATTAACAGGTGAGTTACCAGAAGAGCTTGGATTTCTTCCATTCCTGAATAGATTGCAAATAGATCAGAACAATGTCACCGGACCTATACCTTTATCATTTGCAAAACTAAGCAGCCTTGTACATATTCACATGAACAACAATTCACTTAGTGGCCAAATCCCACCAGAGCTTTCCAACTTAGGAAGTCTTCGTCACTTTCTTCTTGACAACAACAACTTAACAGGATATCTCCCCTCTGAGTTCTCTGAGATGCCAAGCTTAAAGATTGTTCAATTTGATAACAACAACTTTAGTGGAAATAGCATTCCAGATTCTTATGCCAGCATGTCCAAATTGACGAAATTGAGCCTTAGGAACTGCAACTTGCAAGGACCAATTCCTGATTTGAGCACAATGCCGCAGCTTACTTATCTTGACCTCAGTTTCAATCAATTGAATGATTCAATTCCTACTAATAAGCTTTCAGACAATATCACAACCATTGATTTATCAAACAATAAGCTTATTGGAACTATTCCATCCTATTTTTCTGGTCTTCCACGTCTTCAGAAGCTGTCAATTGCAAACAATTCATTGAGTGGAAGTGTTCCATCTACCATTTGGCAGGACAGGATTTTAAATGGACCAGAAACACTTCACCTGGACATGCAAAATAATCAACTTACTAGTATATCGGGCAGTATAAGTCTTCCTCCAAATGTCACACTCTGGCTTTTGGGAAATCCTATGTGCTCAAATAATAACACCTTAGTTCAGTTCTGTGGACCTGAAACTGAAAGTGACGGTAGCATCAATGGTAACTTCAGCGTTAGCTGTCTCAGTCAAGCATGCCCCTCCCCTTATGTATACGCTGTGGACTGTTTCTGTGCTGCACCGTTGGTTGTTAATTATCGATTAAAAAGTCCAGCATTTTCAGATTTCCGCATATACACGAATGCATTTCAGAGCTTGATGTCAAGTGGTCTTAAAATACATATTAGTCAGGTCTTCATTAACAGTTTTGCATGGGAAGAAGGCCCACGGTTGGGAATGAACTTGATGGTTTTTCCTATATATGTTGATAATAGAAGCTCTCCTCGTTTCAATACAAGTGAGGTTATTCGGATCAGAAACTTGTTCCTAGACTTTGATGTTCCAAGCAATGACTTGTTTGGACCTTCGGAACTTCTAGACTTCATTCTCCTGGAACCTTACAGAAATGTGATTTTTACCTCTCCAAGTTCAGGGATAAGCAAAGGTGCACTGGCTGGAATAGTCTTAGGTGCAATTGCCCTGGCAGTTACATTATCTGCAATTGTTGCCATTCTTATATTAAGAATACGCTCAAGAGATTATCGTACACCTTCCAAACGGACAAAAGCAGAATCAAGGATCTCCATAAAAATTGAAGATATAAGAGCATTTGATTATGAAGAAATGGCTGCGGCTACAAACAATTTTAGTGACTCTGCACAAATTGGGCAAGGGGGTTATGGGAGGGTTTATAAAGGTGTTCTTCCAGATGGTACTGTTGTTGCCATAAAACGTGCACAGGAGGGTTCACTGCAAGGTGAGAGGGAGTTTCTCACTGAAATACAGTTGCTATCAAGGTTACATCACCGCAATCTTGTGTCTCTTGTTGGATATTGTGATGAAGAGGGTGAACAGATGTTGGTTTATGAATACATGCCAAATGGAACTCTAAGGGATAACCTTTCTGCTTATTCAAAAAAACCTCTTACTTTTTCCATGAGGTTGAAGATTGCTCTAGGGTCTGCTAAAGGTCTTCTGTATCTACACACCGAAGTAGATTCTCCAATATTCCACCGAGATGTCAAGGCCAGCAATATATTATTGGACTCCAAGTTCACTGCAAAAGTTGCTGATTTTGGACTTTCAAGACTTGCCCCAGTTCCAGATATCGAAGGAAACGTACCTGGTCATATATCTACAGTGGTAAAGGGGACCCCGGGTTATCTTGATCCAGAGTACTTCTTAACTCGCAAATTGACTGACAAGAGTGATGTTTATAGTCTTGGTGTTGTATTTCTGGAACTTGTGACTGGGAGGCCACCAATCTTTCATGGCAAAAATATTATTAGACAGGTTAATGAGGAATACCAATCTGGTGGAGTATTTTCGGTTGTTGATAAACGTATCGAGTCTTATCCTTCTGAGTGTGCGGATAAATTTTTGACTTTAGCCTTAAAGTGTTGCAAAGATGAACCAGATGAGCGGCCTAAAATGATAGATGTGGCCAGAGAGCTTGAAAGCATCTGTTCTATGTTAACTGAGACCGACGCTATGGAGGCAGAATATGTTACAAGTGATTCTGGAAGGGTATTCAATCCACATTCTTCTTCATCTACTACCAGGACTCCTTTTGTTTCAGCAGATGTGTCAGGTAGTGACCTTGTCAGTGGAAAGATACCAACCATTAGGCCAAGATGA 2850 0.4035 MMYLSKGCKCEEVVLCLCFCCYFLLAAGLITDPTEVDALRIIKGSLIDINGNLSNWNRGDPCTSNWTGVMCSNTTLVDGYLHVLQLHLLNLNLSGTLAPEIGRLAYLEVLDFMWNNITGSIPKEIGFINPLRLLLLNGNQLTGELPEELGFLPFLNRLQIDQNNVTGPIPLSFAKLSSLVHIHMNNNSLSGQIPPELSNLGSLRHFLLDNNNLTGYLPSEFSEMPSLKIVQFDNNNFSGNSIPDSYASMSKLTKLSLRNCNLQGPIPDLSTMPQLTYLDLSFNQLNDSIPTNKLSDNITTIDLSNNKLIGTIPSYFSGLPRLQKLSIANNSLSGSVPSTIWQDRILNGPETLHLDMQNNQLTSISGSISLPPNVTLWLLGNPMCSNNNTLVQFCGPETESDGSINGNFSVSCLSQACPSPYVYAVDCFCAAPLVVNYRLKSPAFSDFRIYTNAFQSLMSSGLKIHISQVFINSFAWEEGPRLGMNLMVFPIYVDNRSSPRFNTSEVIRIRNLFLDFDVPSNDLFGPSELLDFILLEPYRNVIFTSPSSGISKGALAGIVLGAIALAVTLSAIVAILILRIRSRDYRTPSKRTKAESRISIKIEDIRAFDYEEMAAATNNFSDSAQIGQGGYGRVYKGVLPDGTVVAIKRAQEGSLQGEREFLTEIQLLSRLHHRNLVSLVGYCDEEGEQMLVYEYMPNGTLRDNLSAYSKKPLTFSMRLKIALGSAKGLLYLHTEVDSPIFHRDVKASNILLDSKFTAKVADFGLSRLAPVPDIEGNVPGHISTVVKGTPGYLDPEYFLTRKLTDKSDVYSLGVVFLELVTGRPPIFHGKNIIRQVNEEYQSGGVFSVVDKRIESYPSECADKFLTLALKCCKDEPDERPKMIDVARELESICSMLTETDAMEAEYVTSDSGRVFNPHSSSSTTRTPFVSADVSGSDLVSGKIPTIRPR 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02240 949 Gene3D Phosphorylase Kinase; domain 1 590 695 - -
Gma02g02240 949 SMART LRR_typ_2 272 296 IPR003591 -
Gma02g02240 949 SMART LRR_typ_2 319 343 IPR003591 -
Gma02g02240 949 SMART LRR_typ_2 176 199 IPR003591 -
Gma02g02240 949 SMART LRR_typ_2 200 223 IPR003591 -
Gma02g02240 949 SUPERFAMILY Protein kinase-like (PK-like) 605 910 IPR011009 -
Gma02g02240 949 Gene3D Ribonuclease Inhibitor 31 295 IPR032675 -
Gma02g02240 949 ProSiteProfiles Protein kinase domain profile. 620 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02240 949 Gene3D Ribonuclease Inhibitor 296 384 IPR032675 -
Gma02g02240 949 Gene3D Transferase(Phosphotransferase) domain 1 696 912 - -
Gma02g02240 949 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 925 - -
Gma02g02240 949 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Gma02g02240 949 CDD STKc_IRAK 626 892 - -
Gma02g02240 949 SMART serkin_6 620 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02240 949 Pfam Protein kinase domain 621 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02240 949 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 14 925 - -
Gma02g02240 949 SUPERFAMILY L domain-like 44 389 - -
Gma02g02240 949 ProSitePatterns Protein kinases ATP-binding region signature. 626 648 IPR017441 GO:0005524
Gma02g02240 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 740 752 IPR008271 GO:0004672|GO:0006468
Gma02g02240 949 ProSiteProfiles Leucine-rich repeat profile. 351 371 IPR001611 GO:0005515
Gma02g02240 949 Pfam Leucine Rich Repeat 297 319 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02240 Gma-Chr2 48458938 48485882 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02240 14 892 Receptor kinase-like Gene Family AT5G01950 55.506 0.0 935
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Gma02g02240 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02240 - - gmx:100785752 1821.98