Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02239 atgtcttatacttgtcctcaatcttacatccagccttgcctgatcgttgTGATTTCCCCCTCTCCAAGTTCATGGATAAGCAAAGGGGCACTGGCTGGAATAGTCTTAGGTGCAATTGCATGTGCAGTTACATTATCCGCAACTGGTTCCATTCTTATATTGAGAACACGCCTGAGAGATTATGGTGCACTTTCCAGACAGCGTAATGCATCTAGGATCTTGGTAAAAATTGATGGTGTAAGATCATTTGATTACAATCAAATGGCTTTGGCTTCAAACAATGTTAGCGAGTCTGCTCAAATTGGACAGGGGGGTTATGGGAAGAGGGAGTTCCTTACAGAAATAGAATTGCTATCAAGGCTACATCATCGCAACCTTGTGTCTCTGATTGGATACTGTGATCAAGAGGGTGAACAGATGTTGGTCTACGAATATATGTCAAATGGAGCGTTAAGGAATCACCTTTCTGTACAAAGAGACTTGGAtatttttatttttaataaaaaagagaaaaaggggtctgcactcacagtgtcaaataatattacactattattattcaatcacaaattttcatgtatgATCTCCATGAGATTGAAGATTGCTCTAGGATCAGCTAAAGGTCTTTTATATCAACACACAGAAGCTAATCCTCCAATATTCCGCCGAGATGTCAAGGCCAGCAATATATTATTGGACTCTAGATACACAGCAAAAGTAGCTGATTTTGGACCTTCACGACTTGCCCCGGTTCTAGATATTGAAGGAAATGTACCTGGTCATGTATCAACAGTGGTAAAGGGGACCCCGGGTTATCTTGATCCAGAGTACTTCTTAACTTACAAATTGACTGACAAGAGTGATGTTTATAGTCTTGGAGAAAATATTATTAGGCACGCATGGTTTGATTTCTCTTGTTAA 921 0.3464 MSYTCPQSYIQPCLIVVISPSPSSWISKGALAGIVLGAIACAVTLSATGSILILRTRLRDYGALSRQRNASRILVKIDGVRSFDYNQMALASNNVSESAQIGQGGYGKREFLTEIELLSRLHHRNLVSLIGYCDQEGEQMLVYEYMSNGALRNHLSVQRDLDIFIFNKKEKKGSALTVSNNITLLLFNHKFSCMISMRLKIALGSAKGLLYQHTEANPPIFRRDVKASNILLDSRYTAKVADFGPSRLAPVLDIEGNVPGHVSTVVKGTPGYLDPEYFLTYKLTDKSDVYSLGENIIRHAWFDFSC 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02239 306 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 19 108 - -
Gma02g02239 306 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 107 293 - -
Gma02g02239 306 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 19 108 - -
Gma02g02239 306 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 107 293 - -
Gma02g02239 306 Gene3D Transferase(Phosphotransferase) domain 1 179 296 - -
Gma02g02239 306 Gene3D Phosphorylase Kinase; domain 1 84 147 - -
Gma02g02239 306 SUPERFAMILY Protein kinase-like (PK-like) 71 293 IPR011009 -
Gma02g02239 306 SMART serkin_6 95 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02239 306 ProSiteProfiles Protein kinase domain profile. 53 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02239 306 Pfam Protein tyrosine and serine/threonine kinase 108 293 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02239 Gma-Chr2 48447075 48454380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02239 26 293 Receptor kinase-like Gene Family AT5G01950 50.853 3.14e-77 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Gma02g02239 PK_Tyr_Ser-Thr 1.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02239 - - gmx:100801035 402.134