Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02236 ATGGCAGAGGTTACTTTGAATTCAAGTGTCAATATCTTATACCATACAACCAAAAAAATATCCATGAAGTTCTACTCCTCCCAAGTGCATCGTTTCCTTTTCATCATTGTTATTCTTTTCCCCCTGGCTATTGCTGACTTAAGTTCTGACAAGCAAGCCCTTCTGGATTTTGCTGCTGCTGTCCCCCATCGCCGTAACCTTAAGTGGAATCCAGCTACCCCAATCTGTTCATCTTGGGTAGGCATCACTTGCAATCCAAATGGCACTCGTGTTGTTTCTGTCCGGCTCCCTGGAATTGGACTAGTTGGCACCATCCCTGCCAATACACTTGGCAAGATTGACTCACTCAGAAATATCAGCCTCCGAGCCAACTTACTCAGTGGAAGTCTTCCTCCTGATATTACGTCTCTTCCTTCTCTACAATATCTCTACCTTCAGCATAATAACCTTTCTGGTAGCGTACCTACCTCGTTGTCCACCCGCCTCAATGTACTTGATTTGTCATACAATTCCTTCAGTGGTGCTATTCCAAAGACATTACAAAACATAACACAACTAATTAAGTTGAACCTCCAGAACAACTCCCTATCTGGACAGATACCAAATCTCAATGTCACTAAGCTCAGGCACTTGAATTTAAGCTACAACCATTTGAATGGCTCTATCCCTGATGCTCTTCAGATTTTCCCGAATTCTTCCTTTGAGGGTAACTCTCTATGTGGATTACCTCTAAAGTCATGCTCTGTAGTCTCCTCTACACCTCCATCAACTCCTGTCTCACCATCCACTCCTGCAAGACACAGCTCCAAAAGTAAACTGAGTAAGGCAGCTATCATTGCAATTGCAGTTGGTGGGGGTGTGCTATTGCTTTTAGTAGCTCTCATCATTGTTCTTTGCTGTTTAAAGAAAAAAGATGATAGAAGCCCCAGCGTAACTAAAGGCAAGGGTCCTAGTGGTGGGAGAAGTGAGAAGCCGAAAGAAGAGTTTGGAAGTGGGGTGCAAGAACCTGAGAAAAACAAGTTGGTTTTCTTTGAGGGCAGTTCTTATAATTTTGACCTTGAGGATTTGCTGAGAGCTTCAGCTGAAGTTCTTGGAAAGGGTAGTTATGGTACTGCGTATAAGGCTATATTGGAGGAGTCAACAACAGTTGTGGTGAAAAGGTTGAAGGAAGTTGTGGTAGGCAAAAGGGAATTTGAACAGCAGATGGAAATTGTGGGAAGGGTTGGACATCACCCAAATGTTGTGCCCCTTCGTGCTTATTATTATTCTAAGGACGAGAAGCTCTTGGTTTATGACTACATCCCAAGTGGCAATCTATCTACCCTCTTGCATGGTAACAGGGCAAGTGGAAGGACTCCATTAGATTGGAATTCCCGAATAAAAATCTCTGTTGGAATTGCCAGAGGAATTGCTCACATACATTCTGTTGGCGGTCCAAAATTCACGCACGGAAATGTCAAATCCTCGAATGTCCTCCTCAACCATGATAATGATGGCTGCATTTCTGATTTTGGCCTGACCCCGCTTATGAATGTTCCTGCAACCCCTTCTAGAGCCGCAGGTTATCGCGCTCCTGAGGTGATTGAAACCCGAAAGCACACCCATAAATCAGATGTGTACAGTTTCGGAATCCTCCTTCTAGAAATGCTTACTGGGAAGGCACCACAACAGTCTCCAGGACGCGATGACATGGTTGATCTCCCAAGGTGGGTCCAGTCTGTTGTTAGGGAAGAGTGGACGGCTGAGGTTTTCGATGTGGAGCTAATGAGGTACCAAAACATTGAAGAGGAAATGGTGCAAATGTTGCAAATTGCCATGGCCTGTGTGGCAAAGGTTCCAGATATGAGGCCTAGCATGGATGAAGTAGTGAGAATGATTGAAGAGATCCGGCTATCTGACTCAGAAAACCGGCCATCTTCAGAAGAGAATAGATCCAAGGAGGAATCAGCTGCTCAAACTCCATAA 1965 0.4453 MAEVTLNSSVNILYHTTKKISMKFYSSQVHRFLFIIVILFPLAIADLSSDKQALLDFAAAVPHRRNLKWNPATPICSSWVGITCNPNGTRVVSVRLPGIGLVGTIPANTLGKIDSLRNISLRANLLSGSLPPDITSLPSLQYLYLQHNNLSGSVPTSLSTRLNVLDLSYNSFSGAIPKTLQNITQLIKLNLQNNSLSGQIPNLNVTKLRHLNLSYNHLNGSIPDALQIFPNSSFEGNSLCGLPLKSCSVVSSTPPSTPVSPSTPARHSSKSKLSKAAIIAIAVGGGVLLLLVALIIVLCCLKKKDDRSPSVTKGKGPSGGRSEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESTTVVVKRLKEVVVGKREFEQQMEIVGRVGHHPNVVPLRAYYYSKDEKLLVYDYIPSGNLSTLLHGNRASGRTPLDWNSRIKISVGIARGIAHIHSVGGPKFTHGNVKSSNVLLNHDNDGCISDFGLTPLMNVPATPSRAAGYRAPEVIETRKHTHKSDVYSFGILLLEMLTGKAPQQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKVPDMRPSMDEVVRMIEEIRLSDSENRPSSEENRSKEESAAQTP 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02236 654 SUPERFAMILY L domain-like 60 232 - -
Gma02g02236 654 MobiDBLite consensus disorder prediction 319 334 - -
Gma02g02236 654 Gene3D Transferase(Phosphotransferase) domain 1 434 652 - -
Gma02g02236 654 MobiDBLite consensus disorder prediction 306 334 - -
Gma02g02236 654 Pfam Protein kinase domain 361 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02236 654 SUPERFAMILY Protein kinase-like (PK-like) 362 636 IPR011009 -
Gma02g02236 654 Pfam Leucine rich repeat N-terminal domain 48 85 IPR013210 -
Gma02g02236 654 Gene3D Ribonuclease Inhibitor 161 249 IPR032675 -
Gma02g02236 654 ProSitePatterns Protein kinases ATP-binding region signature. 364 395 IPR017441 GO:0005524
Gma02g02236 654 MobiDBLite consensus disorder prediction 629 654 - -
Gma02g02236 654 CDD STKc_IRAK 364 629 - -
Gma02g02236 654 Pfam Leucine Rich Repeat 207 227 IPR001611 GO:0005515
Gma02g02236 654 Gene3D Phosphorylase Kinase; domain 1 326 433 - -
Gma02g02236 654 MobiDBLite consensus disorder prediction 629 648 - -
Gma02g02236 654 ProSiteProfiles Protein kinase domain profile. 358 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02236 654 PANTHER OS05G0588300 PROTEIN 15 654 - -
Gma02g02236 654 Gene3D Ribonuclease Inhibitor 49 160 IPR032675 -
Gma02g02236 654 PANTHER LRR RECEPTOR-LIKE KINASE 15 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02236 Gma-Chr2 48411474 48415266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02236 17 652 Receptor kinase-like Gene Family AT5G58300 68.634 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma02g02236 Pkinase 9.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02236 - - gmx:100818344 1201.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02017 14 51175805 51181028 Gma02g02236 02 48411474 48415266 GST
Gma18g00476 18 4463898 4467728 Gma02g02236 02 48411474 48415266 PCT
Gma11g02033 11 34110148 34114422 Gma02g02236 02 48411474 48415266 PCT
Gma02g02236 02 48411474 48415266 Gma18g00476 18 4463898 4467728 PCT
Gma02g02236 02 48411474 48415266 Gma11g02033 11 34110148 34114422 PCT