Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02228 ATGCAAGATCCATCTTCAAACCCTAATTCCAATCCAAATCCCAATCCTCACAACGCCAATGCCGCATCCCAGTTACCGCGTCCGCCGCAGGCCACGGCGTCCACCGCCGTCGCCGGCGCCTTCTCGTCCTCTCTATTCGCGCGCTCCGGCGGACCTCACCACCGGCGAGCCCACTCGGAGATGAGTTTCCGGCTGCCGGACGATATGATGGACCTCTCGCCGTCGGATCCGTTCGCCGGCGGGTCATCGACGGCGAGCATGGAGGAGATCGGATCGGAGGACGACCTGTTCTCGACGTACATTGACGTGGACAAGCTCAGTGGCGCGAACGGGTCGGGCGGTGCCGGAAACGGAGCGGATCCGACCGGCGAACGCGAGAAGAGTCCGGCGAGGCCGCGTCACCGGCAAAGTAGCTCCGTCGATTTCGGGGAAATCATGGATGCGAAGAAAGCTATGCCTCCTGATAAGTTAGCTGAGCTATGGACAATTGATCCCAAGCGTGCTAAGAGaatacttgcaaatcggcaatctgctgctcgatcaaaggagagaaaagcgcgctatatacaagaacttgagcgcaaggttcagactcttcagacggaagccacaactctttctgcccaattgacattataccagAGGGACACATCTGGCCTTAGTACTGAAAATACAGAGCTTAAGCTCCGTCTGCAAGCCATGGAGCAACAAGCACAGCTTCGCGATGCTCTTAATGAAGCATTGAAGAAGGAAGTTGAGAGACTTAAGGTTGCTACCGGTGAGGGGATGAGCCACACTGAATCCTTTAATCTGGGAATGCACCAGATGCCATTTTCCGGATCAAATTTCATTCCAATCCCGCCACAATCAGGTCCTTCTGGTCACCAGAACATGCAGATGCCACCATTTGGTCACTCCCCATCCACAATGCCAACTCATCAACTGCATCAAACAAGTTCTCATCCATATTCAGAAATATTGCAAAATGAACAGCTTGGTCGTTTCCAAGGGCTTGACATTAGTAGCAAAGGATCAACTCTCGTGAAGTCTGAAGGCCCCTCGCTCTCTGCAAGTGAGAGTAGCAGTACATTTTGA 1095 0.4758 MQDPSSNPNSNPNPNPHNANAASQLPRPPQATASTAVAGAFSSSLFARSGGPHHRRAHSEMSFRLPDDMMDLSPSDPFAGGSSTASMEEIGSEDDLFSTYIDVDKLSGANGSGGAGNGADPTGEREKSPARPRHRQSSSVDFGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTSGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKVATGEGMSHTESFNLGMHQMPFSGSNFIPIPPQSGPSGHQNMQMPPFGHSPSTMPTHQLHQTSSHPYSEILQNEQLGRFQGLDISSKGSTLVKSEGPSLSASESSSTF 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02228 364 MobiDBLite consensus disorder prediction 344 364 - -
Gma02g02228 364 MobiDBLite consensus disorder prediction 1 42 - -
Gma02g02228 364 MobiDBLite consensus disorder prediction 124 140 - -
Gma02g02228 364 Coils Coil 182 209 - -
Gma02g02228 364 MobiDBLite consensus disorder prediction 1 144 - -
Gma02g02228 364 Pfam bZIP transcription factor 166 224 IPR004827 GO:0003700|GO:0006355
Gma02g02228 364 PANTHER ATBZIP TRANSCRIPTION FACTOR 6 361 - -
Gma02g02228 364 Coils Coil 230 261 - -
Gma02g02228 364 SMART brlzneu 162 226 IPR004827 GO:0003700|GO:0006355
Gma02g02228 364 MobiDBLite consensus disorder prediction 267 330 - -
Gma02g02228 364 CDD bZIP_plant_RF2 167 216 IPR044759 GO:0003700|GO:0006355
Gma02g02228 364 SUPERFAMILY Leucine zipper domain 166 217 IPR046347 GO:0003700|GO:0006355
Gma02g02228 364 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 6 361 - -
Gma02g02228 364 Gene3D - 165 218 - -
Gma02g02228 364 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 164 227 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02228 Gma-Chr2 48274167 48277096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02228 1 364 bZIP Transcription Factor Family AT2G40620 50.119 1.58e-103 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma02g02228 bZIP_1 3.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02228 - - gmx:100815680 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02004 14 50963391 50965817 Gma02g02228 02 48274167 48277096 GST
Gma18g00491 18 4587947 4591091 Gma02g02228 02 48274167 48277096 PCT
Gma11g02002 11 33383794 33387129 Gma02g02228 02 48274167 48277096 PCT
Gma02g02228 02 48274167 48277096 Gma18g00491 18 4587947 4591091 PCT
Gma02g02228 02 48274167 48277096 Gma11g02002 11 33383794 33387129 PCT