Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02222 ATGGGTAACAACAGGTTCAAGTTATCAGATATGATACCAAATGCTTGGTTTTACAAGCTGAAAGACATGAGCAAATCAAGGAAGAGAAATGGTTCTCATGCTATGAAGAGTAAAGTGTCTTCACCACCAACAACAACAACATCACAAAGGTCGCTGCCAAGATATTCACACTATTTCTCCACTGAGCCTATTAGAGCTGGTAAGCTATACAACACTCCCATTCACACCAAAGACTTGGACATGCCATTCACTGATTCACCTAGAAGGTCTTCCAAGAGAAGGGCTAGGAGAAAAACCATCTACAAGCCTTCTCCCACCGTTGTTTCGTCCTCTTTCATTCCCTCTTCCGGCTATGACTCCGCGAATCATTGGATCAAGCCATGCCAGGTTCAGTCACCAGATTATGATGTGTCTTCAGCTGAAAGCTCTTCTGAGTCTGATCTTCATGAGTATGCTTATTCAGAGTCTGAATGTGACAGCTTTTCTGTTCCTGATTTGCTTAATGGAATGGACACTAATTGCAGCTGCAGAGTTAGCTCTTCCACTAATGACATCATCATTGACATGAACAGTGAGTCCTTCCTTGGGAATCCGGAAAAGCAAGATGGGTTTGATGCAATTTCACAGCTTGGTCTTGCTCCAATATTGACAAGGCCAGTGAAGTTTGATGATAAGGTCATCGAAGCCGCTGAGGTGAGAAGTTCAACTGATTTGGATGAAATGCAGGATGATCAGTCTTTCTCAATTGAGATTAACAAAGAGGAAAGCATTAGAACTCAAAGGAGGAGGAAAAGCAATCATAGAAAGCCCTTTGCTAATTCTGCAGGCATAAGGCTTAGAGTCAATTCTCCAAAACTTGCAAGCAGAAAAGTTCAAGCATGTGCAAGAAGGAGTGTGTCATCCACTGCAAGCAAAGGTTCAAGGAGTACAGGCTTTCCAGATGGATTTGCTGTTGTTAAGTCCTCATTTGATCCACAAAGTGACTTCAGGGAGTCAATGGTGGAGATGATTGTGGAGAACAATATCCGCGCATCGAAGGATTTGGAGGACTTACTTGCTTGCTACCTTTCCCTCAATTCAAGTGAATACCATGATCTCATTGTTAAGGCATTTGAGCAAATTTGGTTTGACTTGGCTCAACTAAGAATGTAA 1152 0.4236 MGNNRFKLSDMIPNAWFYKLKDMSKSRKRNGSHAMKSKVSSPPTTTTSQRSLPRYSHYFSTEPIRAGKLYNTPIHTKDLDMPFTDSPRRSSKRRARRKTIYKPSPTVVSSSFIPSSGYDSANHWIKPCQVQSPDYDVSSAESSSESDLHEYAYSESECDSFSVPDLLNGMDTNCSCRVSSSTNDIIIDMNSESFLGNPEKQDGFDAISQLGLAPILTRPVKFDDKVIEAAEVRSSTDLDEMQDDQSFSIEINKEESIRTQRRRKSNHRKPFANSAGIRLRVNSPKLASRKVQACARRSVSSTASKGSRSTGFPDGFAVVKSSFDPQSDFRESMVEMIVENNIRASKDLEDLLACYLSLNSSEYHDLIVKAFEQIWFDLAQLRM 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02222 383 ProSiteProfiles OVATE domain profile. 318 377 IPR006458 -
Gma02g02222 383 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 316 379 IPR006458 -
Gma02g02222 383 MobiDBLite consensus disorder prediction 27 56 - -
Gma02g02222 383 MobiDBLite consensus disorder prediction 76 98 - -
Gma02g02222 383 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Gma02g02222 383 MobiDBLite consensus disorder prediction 35 56 - -
Gma02g02222 383 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 382 IPR038933 GO:0045892
Gma02g02222 383 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 382 - -
Gma02g02222 383 Pfam Transcriptional repressor, ovate 322 378 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02222 Gma-Chr2 48204721 48205918 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma02g02222 Ovate 3.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02222 - - gmx:100780926 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01999 14 50899434 50900672 Gma02g02222 02 48204721 48205918 GST
Gma18g00507 18 4757701 4759001 Gma02g02222 02 48204721 48205918 PCT
Gma02g02222 02 48204721 48205918 Gma18g00507 18 4757701 4759001 PCT