Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02217 ATGGTCTCCGCTGAAAAACCAATGCCAGAAACCGAACACGCGGCGGCGGAGAACAACACCAACACCGCCCTGTTTGGAAAATACGAGGTCGGAAGGCTCCTAGGATGCGGCGCGTTCGCGAAGGTTTACCACGCGCGCAACACCGAGACTGGGCATAGCGTTGCCGTTAAAGTTATAAGCAAAAAAAAGCTGAACTCGTCAGGCTTAACCTCCAACGTGAAACGCGAGATTTCCATCATGAGCCGCCTCCACCACCCCAACATCGTGAAACTCCATGAAGTGCTGGCGACAAAAACAAAGATCTACTTCATCTTGGAATTCGCGAAAGGCGGCGAGCTCTTCGCGAGAATCGCCAAAGGCCGATTCAGCGAAGATCTCGCGAGACGATGTTTTCAGCAATTAATCTCCGCCGTCGGGTACTGCCACGCGCGCGGCGTTTTCCACCGCGACCTGAAGCCGGAGAATCTCCTCTTGGATGAGCAGGGCAACCTTAAAGTCTCCGACTTTGGACTCAGCGCGGTGAAGGAAGACCAGATAGGGGTGGATGGGTTGCTTCATACGCTGTGTGGGACCCCTGCTTACGTGGCACCCGAGATTCTCGCGAAGAAGGGTTATGATGGGGCTAAGGTCGATGTTTGGTCTTGTGGGATTATCCTCTTTGTTCTTGTCGCTGGGTATCTTCCTTTCAATGATCCGAATCTAATGGTAATGTATAAGAAGATTTACAAAGGAGAATTTCGGTGTCCGAGGTGGTTTCCGATGGAGTTAAGGAGGTTTCTGACGAGGTTGTTGGATACGAATCCTGATACGAGGATAACCGTTGATGAGATCATGAGGGATCCGTGGTTTAAGAAAGGGTATAAGGAGGTAAAGTTTGGGGATTTGGGTTTGGAGTGGAAGAgtgagggtgagggtgagggtgagggtgTGAAGGATTTGAATGCTTTTGATATAATTTCGTTTTCTACGGGATTGAATCTTTCTGGGTTGTTTGATCATTCGTCTTGTGAGGTGGAGGAGAGGGAGAGGTTTTTGCTCAAGGAGTCGCCGGAGAAGGTGGTGGAGACGCTGGTGGCGGCGGCGGAGAAGGAGGGGATTGTGGTGAGGATGAGGAAGGAGTGTGGGGTGGAGTTGGAGGGGTGTGGGGGTAATTTCGCTGCTTTGGTGGAGGTTTACCGGTTACCGGGTGAACTTGTTGTGGTGGAGGTTAGAAGAAGGGACGGGGATGGTGGGGTTTTTAGGGATGTGTGGAGGAATAAGCTGAGGCCGTGTTTGTGTGCTGCGAGTAGCAGTACGACGTCGGATCGGGATGGAACAACTTTGGTGCAGCCGGTGGCCGGTGAATCATGA 1350 0.5067 MVSAEKPMPETEHAAAENNTNTALFGKYEVGRLLGCGAFAKVYHARNTETGHSVAVKVISKKKLNSSGLTSNVKREISIMSRLHHPNIVKLHEVLATKTKIYFILEFAKGGELFARIAKGRFSEDLARRCFQQLISAVGYCHARGVFHRDLKPENLLLDEQGNLKVSDFGLSAVKEDQIGVDGLLHTLCGTPAYVAPEILAKKGYDGAKVDVWSCGIILFVLVAGYLPFNDPNLMVMYKKIYKGEFRCPRWFPMELRRFLTRLLDTNPDTRITVDEIMRDPWFKKGYKEVKFGDLGLEWKSEGEGEGEGVKDLNAFDIISFSTGLNLSGLFDHSSCEVEERERFLLKESPEKVVETLVAAAEKEGIVVRMRKECGVELEGCGGNFAALVEVYRLPGELVVVEVRRRDGDGGVFRDVWRNKLRPCLCAASSSTTSDRDGTTLVQPVAGES 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02217 449 Pfam Protein kinase domain 28 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02217 449 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
Gma02g02217 449 Gene3D Kinase associated domain 1, KA1 308 428 - -
Gma02g02217 449 PANTHER - 8 439 - -
Gma02g02217 449 CDD CIPK_C 314 426 - -
Gma02g02217 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Gma02g02217 449 SUPERFAMILY Protein kinase-like (PK-like) 25 289 IPR011009 -
Gma02g02217 449 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 8 439 - -
Gma02g02217 449 ProSiteProfiles Protein kinase domain profile. 28 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02217 449 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Gma02g02217 449 Gene3D Transferase(Phosphotransferase) domain 1 18 304 - -
Gma02g02217 449 Pfam NAF domain 312 369 IPR004041 GO:0007165
Gma02g02217 449 SMART serkin_6 28 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02217 Gma-Chr2 48157418 48159330 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02217 8 434 CBL-interacting serine-threonine protein kinases AT2G30360 63.678 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma02g02217 Pkinase 2.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02217 - K12761 gmx:100813555 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01995 14 50860473 50862481 Gma02g02217 02 48157418 48159330 GST
Gma18g00510 18 4798179 4800696 Gma02g02217 02 48157418 48159330 PCT
Gma11g01799 11 20530612 20533246 Gma02g02217 02 48157418 48159330 PCT
Gma02g02217 02 48157418 48159330 Gma18g00510 18 4798179 4800696 PCT
Gma02g02217 02 48157418 48159330 Gma11g01799 11 20530612 20533246 PCT