Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02214 ATGTTTCCTATGGAGAACACATCAAACATCTTGATGCAAAAATATGAGTTGGGAAGGTTACTAGGCCAAGGCACATTTGCAAAGGTTTACTATGCACGTAGCACAATCACTAACCAAAGTGTGGCTGTTAAAGTGATTGACAAGGATAAGGTTATAAAAAATGGGCAAGCTGATCACATTAAACGGGAAATATCGGTTATGAGACTGATTAAGCATCCAAATGTTATTGAGCTTTTTGAGGTTATGGCCACCAAGAGTAAGATTTACTTTGTTATGGAATATGCTAAAGGTGGAGAGTTGTTTAAGAAGGTGGCCAAAGGAAAGCTCAAAGAAGAAGTTGCACACAAGTATTTTAGGCAGCTAGTGAGTGCAGTGGATTTTTGTCACAGTCGAGGTGTATACCATAGAGATATAAAGCCAGAGAACATTCTGTTGGATGAAAATGAGAATTTGAAGGTCTCGGATTTCAGGTTAAGTGCGTTGGCCGAGTCCAAACGGCAAGATGGCTTGTTGCACACAACTTGTGGAACACCAGCCTATGTTGCTCCTGAGGTCATCAAAAGGAAAGGTTATGATGGTGCCAAAGCTGATATTTGGTCATGTGGGGTAGTTTTGTTTGTCTTACTGGCTGGTTACTTTCCTTTTCATGACCCTAATATGATGGAGATGTATAGGAAGATAAGCAAGGCAGAGTTTAAATGTCCTAGTTGGTTCCCGCAAGGTGTTCAGCGGCTATTGCGCAAGATGTTGGATCCGAATCCGGAAACTAGGATTTCCATAGATAAGGTTAAGCAATGTTCTTGGTTTAGGAAGGGGCCAAATGGTAGACAGAAAACACAAGAAGGGGAAAACCTGTGTGTCTCTCCTTCAGTTACAAATCATTCTGAACAATGTGGTGATGAAAGTGATGATTTAGCAGCAGAAGCAAGGGAAGAGCAAGTTGTGCCAGTAAGTATAAATGCCTTTGATATAATCTCCCTTTCACCAGGTTTTAATCTTTGTGGATTCTTTGAAGACAGTATTCAGAAAAGGGAAGCAAGGTTTACTTCAAGACAACCGGCATCAGTCATCATCTCCAGGCTGGAAGAAATCGCAAAGCAGATGAGGATGAAAATAAAGAAAAGGGCTGCAGGTTTGTTGAAATTGGAGGGCCTTCATGAAGGTAGGAAGGGGATTTTATCCATTGATACAGAGATCTTTGAGGTTACTCCACTTTTGCATTTGGTGGAGGTGAAGAAATCAAATGGAGATACATTGGAATATGAGAAAATACTGAAGGAGGACATTAGGCCTGCTCTTAAAGACGTTGTTTGGGTTTGGCAAGGTGACCAACAAGAGCAATCACAACAGTTGGAGCAACAGAAGCAGCAACAACAATTACCACAGTCATAA 1392 0.4109 MFPMENTSNILMQKYELGRLLGQGTFAKVYYARSTITNQSVAVKVIDKDKVIKNGQADHIKREISVMRLIKHPNVIELFEVMATKSKIYFVMEYAKGGELFKKVAKGKLKEEVAHKYFRQLVSAVDFCHSRGVYHRDIKPENILLDENENLKVSDFRLSALAESKRQDGLLHTTCGTPAYVAPEVIKRKGYDGAKADIWSCGVVLFVLLAGYFPFHDPNMMEMYRKISKAEFKCPSWFPQGVQRLLRKMLDPNPETRISIDKVKQCSWFRKGPNGRQKTQEGENLCVSPSVTNHSEQCGDESDDLAAEAREEQVVPVSINAFDIISLSPGFNLCGFFEDSIQKREARFTSRQPASVIISRLEEIAKQMRMKIKKRAAGLLKLEGLHEGRKGILSIDTEIFEVTPLLHLVEVKKSNGDTLEYEKILKEDIRPALKDVVWVWQGDQQEQSQQLEQQKQQQQLPQS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02214 463 ProSiteProfiles NAF domain profile. 314 338 IPR018451 GO:0007165
Gma02g02214 463 Gene3D Transferase(Phosphotransferase) domain 1 5 318 - -
Gma02g02214 463 SMART serkin_6 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02214 463 Pfam Protein kinase domain 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02214 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Gma02g02214 463 CDD CIPK_C 320 434 - -
Gma02g02214 463 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 5 455 - -
Gma02g02214 463 PANTHER - 5 455 - -
Gma02g02214 463 Pfam NAF domain 316 374 IPR004041 GO:0007165
Gma02g02214 463 Gene3D Kinase associated domain 1, KA1 319 439 - -
Gma02g02214 463 ProSiteProfiles Protein kinase domain profile. 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02214 463 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Gma02g02214 463 SUPERFAMILY Protein kinase-like (PK-like) 11 289 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02214 Gma-Chr2 48131322 48134046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02214 4 446 CBL-interacting serine-threonine protein kinases AT5G58380 66.740 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma02g02214 Pkinase 5.3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02214 - K07198 gmx:100779316 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00514 18 4824851 4826239 Gma02g02214 02 48131322 48134046 PCT
Gma11g01803 11 20601470 20603223 Gma02g02214 02 48131322 48134046 PCT
Gma02g02214 02 48131322 48134046 Gma18g00514 18 4824851 4826239 PCT
Gma02g02214 02 48131322 48134046 Gma11g01803 11 20601470 20603223 PCT