Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02208 ATGGCACTTTCTTCTTCATCATCTTCAACATCCATATTTGCTTTAGCTTTGTTCACTCTTTTGCTTATAGGAAGTTCTTCAGCTCAACTCTCTGAGAACTTCTATGATAGTAAATGTCCCAAGGTTTTCTATGCCGTAAAATCCGTTCTTCAATCTGCTTTGGCTAAAGAACCTCGCCAGGGAGCATCTATCGTTCGCCTCTTCTTTCATGACTGCTTTGTCAATGGTTGTGATGGATCAGTACTACTTGATGGCCCTTCCTCAGAGAAGACTGCACCTCCCAACAATAACTCTTTGAGAGGTTATGAAGTCATTGATGCCATCAAGTCTAAGGTCGAGACAGTATGCCCCGGAGTGGTGTCATGTGCTGATATTGTAACCATTGCTGCTCGTGACTCTGTTGCAATCCTTGGAGGGCCATATTGGAAGGTTAAACTTGGTAGAAGGGATTCCACGACTGGATTTTTCAACCTTGCTAGCAGTGGTGTGCTCCCAGGACCTGGTTCTTCCCTCAGCGACCTTATCAAAAGATTTGATGATCAAGGGCTCTCTACCAAGGACATGGTTGCATTATCTGGAGCACACACAATTGGAAAGGCAAGGTGTGCAAGTTATAGAGGTCGCATATACAATGAAAACAACATTGACAGTTTATTTGCCAAGGCAAGGCAAAAGAACTGTCCAAAAGGTAGCAATGGAACACCAAAGGACAACAATGTAGCACCACTAGACTTCAAAACTCCTAACCATTTTGACAACGAGTACTTCAAGAACCTCAtcaacaaaaagggtctccttcattctgatcaagagctcttcaatggaggatccacagattcactagtgagagcttacagcaacaatcaaaaggcctttgaggctgactttgtcactgcaatgattaagatgggaaacatcaaacccttaactgggTCAAATGGGCAGATAAGGAAGCAATGTAGGAGGCCCAATTAG 975 0.3662 MALSSSSSSTSIFALALFTLLLIGSSSAQLSENFYDSKCPKVFYAVKSVLQSALAKEPRQGASIVRLFFHDCFVNGCDGSVLLDGPSSEKTAPPNNNSLRGYEVIDAIKSKVETVCPGVVSCADIVTIAARDSVAILGGPYWKVKLGRRDSTTGFFNLASSGVLPGPGSSLSDLIKRFDDQGLSTKDMVALSGAHTIGKARCASYRGRIYNENNIDSLFAKARQKNCPKGSNGTPKDNNVAPLDFKTPNHFDNEYFKNLINKKGLLHSDQELFNGGSTDSLVRAYSNNQKAFEADFVTAMIKMGNIKPLTGSNGQIRKQCRRPN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02208 324 PANTHER PEROXIDASE 72-RELATED 3 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma02g02208 324 Pfam Peroxidase 46 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma02g02208 324 PANTHER PEROXIDASE 3 323 - -
Gma02g02208 324 Gene3D Peroxidase, domain 2 165 303 - -
Gma02g02208 324 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma02g02208 324 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma02g02208 324 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma02g02208 324 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma02g02208 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma02g02208 324 CDD secretory_peroxidase 29 322 IPR033905 GO:0004601|GO:0042744
Gma02g02208 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Gma02g02208 324 SUPERFAMILY Heme-dependent peroxidases 29 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma02g02208 324 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Gma02g02208 324 Gene3D - 33 324 - -
Gma02g02208 324 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma02g02208 324 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma02g02208 324 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma02g02208 324 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma02g02208 324 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma02g02208 324 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma02g02208 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma02g02208 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma02g02208 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma02g02208 324 ProSiteProfiles Plant heme peroxidase family profile. 29 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02208 Gma-Chr2 48068729 48073190 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02208 1 324 Peroxidase AT5G58400 59.021 2.87e-138 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02208 K00430 - gmx:100812478 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01986 14 50800693 50805532 Gma02g02208 02 48068729 48073190 GST
Gma18g00517 18 4856109 4860637 Gma02g02208 02 48068729 48073190 PCT
Gma11g01806 11 20633497 20638441 Gma02g02208 02 48068729 48073190 PCT
Gma02g02208 02 48068729 48073190 Gma18g00517 18 4856109 4860637 PCT
Gma02g02208 02 48068729 48073190 Gma11g01806 11 20633497 20638441 PCT