Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02200 ATGCCTACTTCAACTTCTTCTCAATGGCTAAGCCTTGTTGGCATCATTTGGCTCCAATCCATAAATGGAACAAACACCAATTTCCCTGCTTACTCCTCCCAGCTGAAGCAGCTCCTCTCCATGTCCCAGTTTCAGCTCAACAACCTTGCTTTTGCCTCAGATGCAGGCAAACTCTTTGGTTTCTTTTCTGGCATGGCTGCTTTTCACCTCCCCCTTTGGCTTGTCCTCATGATTGGTTCAACTCTTGGATTAATTGGTTATGGTGTTCAATATCTCTTCATATCAAACCAAATCTCCTCTCTCTCCTATTGGCATGTGTTTTTGCTAACTGTTCTAGCAGGGAACAGCATTTGCTGGATCAACACTGTTTGCTATGTGATCACAATAAGGAACTTCTCATCCGATCATCGCCAAGTTGCTGTAGGGTTAACTACTAGTTACCAAGGGTTGAGTGCTAAGATTTTCACCAGCATTGTTGATGCTGTTTCTTTACACAAAAAGGCTAAAACATTTCTCTTTCTGAACTCATTCTTGCCTTTGATAGTTGCCCTAATAGCAGCTCCTGTGGTTAGAGAAATTGAAGCTGTCACAACAAGGCCTAAGCACATTATGAGTGTTGGATTTGTTGTTATGTTTGTGATTACAATTGCCACTGGAATATATGCTGTGATGAGCAGCTTGGAATTTGTGTCAAGCAAAATATCTCCACTTGGTAGCCTTATTGGCATGTTAGTGTCCCTTTTATTCCCTCTATTAGTTCCACTTTCCATGAAGATCAATGCACTAGTAGGGTCATGGCACAAAAATAGAGAAAAACAAAGAGTATATCATTTTACTTCTGAGGAGAGTCATGATGATGAAGGCAGGATAGAGAATGAGGTTAAAGAGGGTGAAGATAGCAGAGAAGTTAATCAAGAAGTTGGTATTGGTATAAGAGAAGAAATAGGAGTGAAATTGATGCTGAGAAGAATAGATTTCTGGTTATATTTCTTTGTCTATTTATTCGGTGCAACACTTGGTTTAGTATTTCTGAACAACTTGGGACAAATTGCTGAATCCCGAGGTTACTCTAGAACTTCATCATTGGTGTCTTTGTCTTCTTCTTTTGGGTTCTTCGGCCGTCTCATGCCATCTATAGTGGACTACTTTTACAGGGGTAAGTGTACAATATCAAGACCAGCTTCTATGGTAGCATTAATGGCTCCAACTGCAGGGTCATTTTTCTTACTACTCCACAATACTAACCTTGCCCTCTATGTTGGCACTGCCATAATTGGAGTTTGTACTGGAGCAATCACTTCAATTTCTGTGTCCACCACCACAGAGCTATTTGGAACCAAGAATTTCTCTGTGAACCATAATGTGGTGGTGGCCAACATTCCAGTGGGGTCTTTTTTGTTTGGCTACTTGGCTGCTTTTGTTTACCATAAGGGAGGGCATCATGAACATGGGAAATGCATGGGCATGGAATGCTACAGAGACACTTTCATCATATGGGGTTCCCTTTGTTTCTTTGGTACCTTTTTGGCTTTTGTTCTACATGTTAGGACTCGCAAGTTTTACTCATATAAACTATAG 1578 0.4081 MPTSTSSQWLSLVGIIWLQSINGTNTNFPAYSSQLKQLLSMSQFQLNNLAFASDAGKLFGFFSGMAAFHLPLWLVLMIGSTLGLIGYGVQYLFISNQISSLSYWHVFLLTVLAGNSICWINTVCYVITIRNFSSDHRQVAVGLTTSYQGLSAKIFTSIVDAVSLHKKAKTFLFLNSFLPLIVALIAAPVVREIEAVTTRPKHIMSVGFVVMFVITIATGIYAVMSSLEFVSSKISPLGSLIGMLVSLLFPLLVPLSMKINALVGSWHKNREKQRVYHFTSEESHDDEGRIENEVKEGEDSREVNQEVGIGIREEIGVKLMLRRIDFWLYFFVYLFGATLGLVFLNNLGQIAESRGYSRTSSLVSLSSSFGFFGRLMPSIVDYFYRGKCTISRPASMVALMAPTAGSFFLLLHNTNLALYVGTAIIGVCTGAITSISVSTTTELFGTKNFSVNHNVVVANIPVGSFLFGYLAAFVYHKGGHHEHGKCMGMECYRDTFIIWGSLCFFGTFLAFVLHVRTRKFYSYKL 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02200 525 Pfam Nodulin-like 8 255 IPR010658 -
Gma02g02200 525 Gene3D MFS general substrate transporter like domains 196 518 IPR036259 -
Gma02g02200 525 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 523 - -
Gma02g02200 525 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 523 - -
Gma02g02200 525 SUPERFAMILY MFS general substrate transporter 8 519 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02200 Gma-Chr2 47975366 47977327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02200 9 524 Nodulin-like Gene Family AT2G30300 48.859 9.24e-156 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02200 - - gmx:100808034 1014.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01980 14 50719552 50721724 Gma02g02200 02 47975366 47977327 GST
Gma18g00523 18 4944226 4946381 Gma02g02200 02 47975366 47977327 PCT
Gma11g01818 11 20920024 20921882 Gma02g02200 02 47975366 47977327 PCT
Gma02g02200 02 47975366 47977327 Gma18g00523 18 4944226 4946381 PCT
Gma02g02200 02 47975366 47977327 Gma11g01818 11 20920024 20921882 PCT