Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02195 ATGGCATCTTCTTCTGGTAGTTTAGACACCTCTGCAAGTGCAAACTCCTTCACCAACTTCACCTTCTCCACACACCCTTTCATGACCACTTCTTTCTCTGACCTTCTTGCTTCTCCCACAGACAACAACAAACCACCACATGGTGGTGGTGGTGGTTTGTCTGAGAGAACTGGCTCTGGTGTCCCCAAATTCAAGTCCACACCACCACCTTCTCTGCCTCTCTCTCCCCCTCCCATTTCTCCTTCTTCCTACTTTTCTATTCCTCCTGGTTTGAGCCCTGCTGAGCTTCTTGACTCACCTGTTCTCCTTAACTCTTCCAACATTCTGCCATCTCCAACAACTGGAGCATTTGTTGCTCGGAGCTTCAATTGGAAGAGCAGTTCCGGGGGGAACCAGCGAATTGTCAAAGAAGAAGACAAAGGCTTCTCAAATTTCTCCTTTCAAACCCAACAAGGACCTCCTGCTTCATCCACAGCAACATATCAGTCTTCAAATGTCACAGTTCAAACACAACAGCCATGGAGTTATCAGGAGACCACAAAGCAGGATAATTTTTCTTCAGGAAAGAGCATGATGAAAACTGAAAAATCTTCATCCATGCAAAGTTTTTCCCCTGAGATTGCTAGTGTCCAAAATAATCATAGCAATGGGTTTCAATCGGATTATGGCAATTACCCCCCACAATCTCAGACCTTAAGCAGAAGGTCAGATGATGGGTACAATTGGAGGAAATATGGCCAAAAACAAGTGAAGGGAAGTGAAAATCCAAGAAGTTATTACAAATGCACATACCCCAACTGCCCTACAAAGAAGAAGGTTGAGAGGTCTTTAGATGGACAAATTACTGAGATCGTTTATAAGGGTACTCATAACCATCCTAAGCCTCAAAATACTAGGAGAAACTCATCAAATTCCTCTTCTCTTGCAATCCCTCATTCAAATCCCATCAGCGCTGAAATCCCAGATCAATCCTATGCCACACATGGAAGTGGACAAATGGATTCAGCTGCCACCCCAGAAAACTCATCAATATCAATTGGAGATGATGATTTTGAGCAGAGTTCTCAAAAGTGTAAATCAGGAGGGGATGAATATGATGAAGATGAACCTGATGCCAAAAGATGGAAAATTGAAGGTGAAAATGAGGGTATGTCTGCCCCTGGAAGTAGAACAGTAAGAGAACCTAGAGTTGTAGTTCAGACAACCAGTGACATTGATATCCTAGATGATGGGTATAGATGGAGAAAATACGGGCAGAAAGTAGTGAAGGGCAATCCAAATCCAAGGAGTTACTACAAGTGTACACACCCAGGATGTCCAGTGAGGAAGCATGTGGAAAGAGCTTCACATGACCTAAGGGCTGTGATCACAACCTATGAGGGGAAGCACAACCATGATGTTCCTGCAGCTCGTGGCAGTGGCAGCCATTCTGTTAACAGACCAATGCCAAACAATGCTTCAAACCCTACCAACACTGCAGCCACTGCCATAAGTCCCTTGCAAGTGATCCAACACAGTGACAATTCCCATCAGAACCAAAGATCTCAAGCACCACCAGAGGGGCAATCACCCTTCACCCTAGAGATGCTACAAAGTCCAGGAAGTTTTGGATTCTCAGGGTTTGGGAATCCAATGCAATCTTACATGAATCAGCAGCAACAACAACTATCTGACAATGTTTTCTCTTCCAGAGCCAAGGAGGAGCCTAGAGATGACATGTTCCTTGAGTCTCTACTATGCTGA 1743 0.4452 MASSSGSLDTSASANSFTNFTFSTHPFMTTSFSDLLASPTDNNKPPHGGGGGLSERTGSGVPKFKSTPPPSLPLSPPPISPSSYFSIPPGLSPAELLDSPVLLNSSNILPSPTTGAFVARSFNWKSSSGGNQRIVKEEDKGFSNFSFQTQQGPPASSTATYQSSNVTVQTQQPWSYQETTKQDNFSSGKSMMKTEKSSSMQSFSPEIASVQNNHSNGFQSDYGNYPPQSQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQNTRRNSSNSSSLAIPHSNPISAEIPDQSYATHGSGQMDSAATPENSSISIGDDDFEQSSQKCKSGGDEYDEDEPDAKRWKIEGENEGMSAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPMPNNASNPTNTAATAISPLQVIQHSDNSHQNQRSQAPPEGQSPFTLEMLQSPGSFGFSGFGNPMQSYMNQQQQQLSDNVFSSRAKEEPRDDMFLESLLC 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02195 580 MobiDBLite consensus disorder prediction 505 525 - -
Gma02g02195 580 SUPERFAMILY WRKY DNA-binding domain 235 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma02g02195 580 ProSiteProfiles WRKY domain profile. 237 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g02195 580 SUPERFAMILY WRKY DNA-binding domain 400 468 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma02g02195 580 MobiDBLite consensus disorder prediction 171 236 - -
Gma02g02195 580 MobiDBLite consensus disorder prediction 66 84 - -
Gma02g02195 580 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 43 556 - -
Gma02g02195 580 MobiDBLite consensus disorder prediction 33 87 - -
Gma02g02195 580 MobiDBLite consensus disorder prediction 287 390 - -
Gma02g02195 580 Pfam WRKY DNA -binding domain 237 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g02195 580 Pfam WRKY DNA -binding domain 409 465 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g02195 580 MobiDBLite consensus disorder prediction 544 562 - -
Gma02g02195 580 SMART WRKY_cls 236 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g02195 580 SMART WRKY_cls 408 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g02195 580 Gene3D WRKY domain 224 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma02g02195 580 MobiDBLite consensus disorder prediction 291 351 - -
Gma02g02195 580 ProSiteProfiles WRKY domain profile. 403 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g02195 580 MobiDBLite consensus disorder prediction 544 580 - -
Gma02g02195 580 MobiDBLite consensus disorder prediction 352 380 - -
Gma02g02195 580 MobiDBLite consensus disorder prediction 462 492 - -
Gma02g02195 580 Gene3D WRKY domain 395 461 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma02g02195 580 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 43 556 IPR044810 GO:0003700
Gma02g02195 580 MobiDBLite consensus disorder prediction 477 492 - -
Gma02g02195 580 MobiDBLite consensus disorder prediction 171 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02195 Gma-Chr2 47904878 47907873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02195 234 579 WRKY Transcription Factor Family AT2G38470 55.989 5.64e-115 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma02g02195 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02195 K13424 - gmx:100127385 1080.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01974 14 50603541 50606495 Gma02g02195 02 47904878 47907873 GST
Gma18g00530 18 4998201 5001717 Gma02g02195 02 47904878 47907873 PCT
Gma11g01827 11 21057555 21061575 Gma02g02195 02 47904878 47907873 PCT
Gma02g02195 02 47904878 47907873 Gma18g00530 18 4998201 5001717 PCT
Gma02g02195 02 47904878 47907873 Gma11g01827 11 21057555 21061575 PCT