Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02182 ATGGGATGCACTTCGCTGCTTAGAAGCCCCAAGAAAGAAGAACAAGAAGTGCCCGATGCCAATTCTAACCAACCTTACACCTATGAAGATTTCAATATTTTGGACGAACTCGAAGGGGTCTTGAGCACCAAGGAAGAACAAGATTCTTCGTTGCCGCAACAAAAATCTTCTAGTAGTGAATTCCATTGGGATTTCATGGAATGGGAGGAGTTTCAACCCCCCAATATTGAAGAGGAAGGAGAAGATGAAAATGAAGGGAAAGAGAACAGGAGGAGCAAATGCCTCTTTGATGAGGAGGAGCAAGAGATGAAGATTGAAAACAATAATAATATTGTTGGGTTTTGGGAAATGGATGATGAGAAGATGGTGGCTTTGAATTTGAACTTGAACTATCAAGAGGTTTTGGATGCATGGTCTGACCGAGGCTCTCTATGGGCTGATGATTGTTCTCTTTCATTCGCCACCAATAATGCCTACTATATGGGAGAAGTGCCGGTATTGGAAGAAGAGAGAGCAAGAAGAGAAGCATGTGTTCTTAGGTACAAAGAGAAGCGCCAGAACAGGTTGTTCTCAAAGAAGATAAGATACCAAGTTCGGAAATTAAACGCTGATAAAAGACCAAGAATCAAGGGTCGCTTTGTGAAGAGACTCTGA 654 0.422 MGCTSLLRSPKKEEQEVPDANSNQPYTYEDFNILDELEGVLSTKEEQDSSLPQQKSSSSEFHWDFMEWEEFQPPNIEEEGEDENEGKENRRSKCLFDEEEQEMKIENNNNIVGFWEMDDEKMVALNLNLNYQEVLDAWSDRGSLWADDCSLSFATNNAYYMGEVPVLEEERARREACVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02182 217 MobiDBLite consensus disorder prediction 1 59 - -
Gma02g02182 217 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 4 216 - -
Gma02g02182 217 PANTHER CCT MOTIF FAMILY PROTEIN 4 216 - -
Gma02g02182 217 MobiDBLite consensus disorder prediction 44 59 - -
Gma02g02182 217 Pfam CCT motif 174 216 IPR010402 GO:0005515
Gma02g02182 217 ProSiteProfiles CCT domain profile. 174 216 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02182 Gma-Chr2 47728314 47729591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02182 118 216 C2C2-CO-like Transcription Factor Family AT1G73870 45.763 2.21e-21 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma02g02182 CCT 1.4e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02182 - - gmx:100803772 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01958 14 50401648 50403212 Gma02g02182 02 47728314 47729591 GST