Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02178 ATGTGGGTTGTGGGGTTGTGGCTAAGGCCTCCAAGGAAGCTTAGAACCAACCCGTTTTGGAATAAAAGAGGAGGCAGGGTTCAGCTGCAGTCAATGCTGATGCCATTTTCAAAATTTGATCACGCAGAAAAGGGTGATGCATTATATGGTTTTTATTTTTGTTTCACTATGCAGTTAGCAAATGAAAACAATGACGTTCAATTTGTTGACTTTCTAGAAAGCGAGTTTTTGGTTGGTCAGGTGGAAGACATTAAAAAGATCTCAGAATATGTGGCTCAGTTAAGAAGAATGGGCAGAGGACATGGATCTTCCAGTTCACCAAAGAGAAGATGCAGTGAGCAGTTTAGTGCAAGAGTTACAAACCCCGTGTATGGTTGTGTTGGAATCATATCTTACCTAGAAAGTCAAGTTTCTGAGTTACAAAAGCAGCTTGCGGTAGCTCAGGCAGAGATTCTTAGCATGCAAATGTAG 471 0.414 MWVVGLWLRPPRKLRTNPFWNKRGGRVQLQSMLMPFSKFDHAEKGDALYGFYFCFTMQLANENNDVQFVDFLESEFLVGQVEDIKKISEYVAQLRRMGRGHGSSSSPKRRCSEQFSARVTNPVYGCVGIISYLESQVSELQKQLAVAQAEILSMQM 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02178 156 ProSitePatterns Ferritin iron-binding regions signature 2. 65 85 IPR014034 -
Gma02g02178 156 Pfam Lateral organ boundaries (LOB) domain 116 148 IPR004883 -
Gma02g02178 156 PANTHER FERRITIN 19 102 IPR001519 GO:0006826|GO:0006879|GO:0008199
Gma02g02178 156 Coils Coil 130 156 - -
Gma02g02178 156 Gene3D - 17 106 IPR012347 -
Gma02g02178 156 PANTHER FERRITIN-2, CHLOROPLASTIC-LIKE 19 102 - -
Gma02g02178 156 SUPERFAMILY Ferritin-like 20 102 IPR009078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02178 Gma-Chr2 47696790 47704454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02178 116 156 AS2 family AT2G30130 75.610 2.54e-14 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma02g02178 LOB 1.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02178 K00522 - gmx:100781581 133.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01954 14 50356476 50357781 Gma02g02178 02 47696790 47704454 GST