LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma02g02174	ATGGCCGCAGCCTTAGAGTGCTGGTCCAGCCGCACCACCACGTCCGCCGCTGCCGCCACCGACGACGACACGGTGGAGCAGGTCCTCATGCGCACCCACCACAGATCCGAGGGAACCACCACCACTTCCACCCACAACAACAAAGACAACCTTCCCTCCGCCATCCCCGTCCACAAGAAGCTCCAGAAGCTCACTCGCAACGTCTCCGAAGCTATTGCTTCTTTCAGAAACTCCCTCAACCTCGATTCTCCTCCTTCTTCCAACGCTGATGCTTCTTCTCGGAAACTCGCGTGGGGAAGCGTTGTTCGCAATCTCACTCAGCTTTACCCTGGAAGCCAGCTCCCCGAGAAACTCATGTCCAACATTCGCAAGCATTACGATTCCTTGCCCCTCAGTTATGCACAGGCGGAGTTTGATATGAAGAATGTGTTTCTTCACATAAAGTTGATGGAGCAAGCTTCAGAGAGTGACCAGCCAGCGATTTTAATTCAAGAGGAATGTGATGGTGAGATTCAGGGGTCTGCTTTGAGGCTCACGTTTGCTTGCAACTCTCCGATTTCGTGGCCTGCAATGTCGGGTGCGTTGGATAGTTCCTCCATTTGCTGCAAGAGGATGCAGATCTTTGAGAAGAAGGGTTTCACCTTGGGGGTTGTGCTTCTTGTGGTTCTACCTGGGCATGATAAGTTGGTGAGGACCAGGGTTGAAAATGCTTTGAAGTTTGCCATGAAGAAGCCCAAAACCGGTGCCGTGAAGCTTCCCTTTGGGCTCTGTGGGTGCCAGGAAGAGAATTCTAAAGGAAGAGAGCTTGTGGAGATTGAAGAAGAAACCGGTGATGGTTACCGCGGAAAGGAGTTTGAGAATTCAAGCCAAAGGATTCAGCTTCAGGTGCCTTTGCCTTCTTCATCTTTTGTTGTGTCAGTGGATGAATGGCAGACCATAAAGTCAGGTGGGAATGAGATTGAGAAATGGTTGTTGAATTCAGATAGTGTTGAGTTTGTTGAGCAGATTGGTCCGAATTCATATAGGGGAGTGTATATGGGGAAGAGGGTTGGGATTGAGAAGCTGAAGGGTTGTGATAAAGGGAATTCTTATGAGTTTGAGCTCCACAAGGATCTTCTGGAACTCATGACTTGTGGCCATAGAAACATTCTGCAGTTTTGTGGTATTTGTGTGGATGATAATCATGGATTGTGTGTGGTGACCAAGTTCATGGAAGGTGGATCTGTTCATGACTTGATGATGAAGAACAAAAAGCTTCAGACTAAGGATGTTGTGAGGATTGCTGTTGATGTTGCTGAAGGGATCAAGTTTATGAATGACCATGGTGTAGCATATAGAGACCTTAATACACGGGGGATTCTGTTGGATAAGCATGGGAATGCTTGCTTGGGAGATATGGGTATAGTCACTGCCTGCAAGAGTGTTGGAGAAGCAATGGAGTATGAAACTGATGGTTATAGGTGGCTAGCTCCAGAGATAATTGCAGGGGATCCAGAGAATGTGACAGAGACATGGATGAGTAACGTTTATAGTTTTGGGATGGTAATTTGGGAGATGGTAACTGGTGAAGCAGCTTATTCTTCATTTTCACCTGTACAAGCAGCAGTTGGCATTGCTGCATGTGGCCTTCGACCTGAAATCCCAAAAGACTGCCAACAAACTCTAAAACACATTATGACAAAGTGCTGGAACAACACCCCTTCAAAACGTCCTCACTTCTCTGAAATTTTAGCCATATTGCTGCGACCAAACAACAACAATAGATAA	1767	0.472	MAAALECWSSRTTTSAAAATDDDTVEQVLMRTHHRSEGTTTTSTHNNKDNLPSAIPVHKKLQKLTRNVSEAIASFRNSLNLDSPPSSNADASSRKLAWGSVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPLSYAQAEFDMKNVFLHIKLMEQASESDQPAILIQEECDGEIQGSALRLTFACNSPISWPAMSGALDSSSICCKRMQIFEKKGFTLGVVLLVVLPGHDKLVRTRVENALKFAMKKPKTGAVKLPFGLCGCQEENSKGRELVEIEEETGDGYRGKEFENSSQRIQLQVPLPSSSFVVSVDEWQTIKSGGNEIEKWLLNSDSVEFVEQIGPNSYRGVYMGKRVGIEKLKGCDKGNSYEFELHKDLLELMTCGHRNILQFCGICVDDNHGLCVVTKFMEGGSVHDLMMKNKKLQTKDVVRIAVDVAEGIKFMNDHGVAYRDLNTRGILLDKHGNACLGDMGIVTACKSVGEAMEYETDGYRWLAPEIIAGDPENVTETWMSNVYSFGMVIWEMVTGEAAYSSFSPVQAAVGIAACGLRPEIPKDCQQTLKHIMTKCWNNTPSKRPHFSEILAILLRPNNNNR	588

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gma02g02174	588	MobiDBLite	consensus disorder prediction	1	20	-	-
Gma02g02174	588	ProSiteProfiles	Protein kinase domain profile.	330	585	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Gma02g02174	588	Gene3D	Transferase(Phosphotransferase) domain 1	323	584	-	-
Gma02g02174	588	SUPERFAMILY	Protein kinase-like (PK-like)	307	580	IPR011009	-
Gma02g02174	588	PRINTS	Tyrosine kinase catalytic domain signature	401	414	IPR001245	GO:0004672\|GO:0006468
Gma02g02174	588	PRINTS	Tyrosine kinase catalytic domain signature	437	455	IPR001245	GO:0004672\|GO:0006468
Gma02g02174	588	PRINTS	Tyrosine kinase catalytic domain signature	507	529	IPR001245	GO:0004672\|GO:0006468
Gma02g02174	588	PRINTS	Tyrosine kinase catalytic domain signature	551	573	IPR001245	GO:0004672\|GO:0006468
Gma02g02174	588	PANTHER	PROTEIN KINASE SUPERFAMILY PROTEIN	1	584	-	-
Gma02g02174	588	PANTHER	SERINE-THREONINE PROTEIN KINASE	1	584	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma02g02174	Gma-Chr2	47640955	47645993	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma02g02174	321	580	MAP Kinase Kinase Kinase	AT2G17700	34.457	7.59e-53	187

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-7	Gma02g02174		PK_Tyr_Ser-Thr	3.4e-43	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma02g02174	-		-	gmx:100801110	1143.26

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma11g01859	11	21673735	21677627	Gma02g02174	02	47640955	47645993	PCT
	Gma02g02174	02	47640955	47645993	Gma11g01859	11	21673735	21677627	PCT

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