Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02166 ATGCCAAGTCAATCCGAGTCACCAAGCAACTCACTGAGTCAACTCTCTCGGAACATGTTCTCCGACAACAACAGCAACATCATGCTCGCAGCCATAGTTTCCTTGCTCCTAGTAATCCTCTTTGTCCTCCTACTCCATGTGTACGCCAAATGGTTCTTATTCCAGGCACAAACACGTTCGCAGACTCGCTGGCGGCGAACTCCGGTGACCGTCTCCGGCGTTCTGGAACCTTCCCATTTTCATAGTATCAACATAGAATCCTCACCCACGTGCAACAAAGGCCTTGACTCGGCCTCACTTTCGGCAATTCCAATGTTTGTGCAAGGAACAGAGAAAACAGAGGAATCGGAATGTGTCATTTGCTTGAGTGTTATTGAAGAGGGTGAGATTGGAAGGGGATTGCCGAAGTGTTGCCATGCTTTTCACATGGAGTGCATTGACATGTGGTTGAGTTCACATTGCAATTGTCCAATTTGTAGAGCTCCTATTGTGGTAAGTGGAGATTCTCAATTGGGTTCTGTTGATGGTGATAGTGATGGTGTGGTTGAGATTGTGGTTGTTACTCCCAGTTATGAGAATAGTGAGAATGAGCATGGTGAAGTGAGTGATTCTGTTCCCGAAACTTCTTCATCTTCGTTGGGTTTCTCTCTGAAGAGATTGCTGAGTAAGGTTTTTCTGTCACCTGATCATGTAACTGAATTGGATGCTTCGCAGTAA 717 0.4589 MPSQSESPSNSLSQLSRNMFSDNNSNIMLAAIVSLLLVILFVLLLHVYAKWFLFQAQTRSQTRWRRTPVTVSGVLEPSHFHSINIESSPTCNKGLDSASLSAIPMFVQGTEKTEESECVICLSVIEEGEIGRGLPKCCHAFHMECIDMWLSSHCNCPICRAPIVVSGDSQLGSVDGDSDGVVEIVVVTPSYENSENEHGEVSDSVPETSSSSLGFSLKRLLSKVFLSPDHVTELDASQ 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02166 238 ProSiteProfiles Zinc finger RING-type profile. 118 160 IPR001841 -
Gma02g02166 238 CDD RING-H2_EL5_like 117 160 - -
Gma02g02166 238 Pfam Ring finger domain 117 160 IPR001841 -
Gma02g02166 238 SUPERFAMILY RING/U-box 110 166 - -
Gma02g02166 238 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 1 233 IPR044675 -
Gma02g02166 238 PANTHER - 1 233 - -
Gma02g02166 238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 166 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02166 Gma-Chr2 47530909 47531625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02166 26 161 Rapid Response to Elicitors AT3G16720 39.568 1.24e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02166 - - gmx:102665763 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01942 14 50201522 50202247 Gma02g02166 02 47530909 47531625 GST
Gma18g00569 18 5510927 5511742 Gma02g02166 02 47530909 47531625 PCT
Gma11g01899 11 23910128 23915820 Gma02g02166 02 47530909 47531625 PCT
Gma02g02166 02 47530909 47531625 Gma18g00569 18 5510927 5511742 PCT
Gma02g02166 02 47530909 47531625 Gma11g01899 11 23910128 23915820 PCT