Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma02g02161 | ATGGTTTCGTGGGTGAGAGGCAAGTGCGTCGGTAACGGCGCGTTTGGGGTTGTGAACGTGGCGATTTCGAAAAGAGATAATCGCGTTTTCGCGGTGAAGTCCGTGGATTGTGGAAGGGGGCTTTCTGGTCATCAGGTGGAGGCGTTGGAGAACGAGATTGGGATTCTGAAGCGGGTGGCTTCGCCGCACGTGGTGGCTTATCTCGGAGACGATGTCACGTGCGAAGGAACGGCGTCGTTCAGGAATCTTCATCTGGAGTACATGCCAGgtggcaccgtcgctgacttggaccgcgctgacgtggacGAGCGGTTAGTGAGGCGCTTCGCGTGGTGCCTCGTGTCCGCGCTGCGTGACGTTCACGCGCAAGGCTTCGTCCACTGCGACGTGAAAGGGAGGAACGTGCTTCTCTCCGGCGACGGCGAAATCGTGAAGCTCGCCGATTTTGGCACGGCGGTGGAAATTGAATCCTCGCCGGCGGAGATGTTATTGTTGTCGCGGGGGAGTCCGATGTGGATGGCGCCGGAGGTGGTTCGCCGGCAGAGGCAGGGGCCGGAGTCCGACGTGTGGTCGCTCGGATGCACGGTGATCGAGATTGTCACCGGGAAACCGGCGTGGGAGGATCGCGGCGTCGACACGCTGACTCGAATCGGTTACTCAGACGAGTTGCCGGAATTTCCAAAGCAGTTGTCGGAGCTAGGGAAGGATTTTCTCGAGAAGTGTCTCAGAAGAGAACATAGTGAACGGTGGAGCTGCGATCAGCTGCTGCAGCATCCATTTTTGCTTCCCTACTACGCGGTTGCTGAATCGTCGCCTCGCTGCGTTCTCGACTGGGTTGACTCGGAGCTCAACTCCGAGTCAGATTGTAACGACCGTGATCATCAAGAAGACGTGTTTATAAAATTTACCAACAGCGAAGAAAAATCAGTTATTAAAAATAGAATTAGTAAATTTGCGACAGAGTCGAGGGTAAATTGGGAAACGCAGGGTTGGATAGTGGTGAGGGAAATTGAGTCCAACGGAAAACCAACGACAACGGGAACAGAAACAGAAATAGAGGAAGGAGCATGTACGTGTGAGTGTGATGGTGTTGGTTCGAGCAAAGAAGGGGTAAATTGGGAGTTTCACAATGTGGCGGGGACTGGTATGGAATATTCGGATTCTGTAGGGGTAAATCGGGGAATAGGAAAGTTGGGTGGGAGTAACACCGCTGGAGGGGGTGGTGGTTGGAGCTGTCGGCAGGACAAGGTCACAAGAAGCATGCCTCATGGTCATGCCTACGCCGCAATAACACTTTTTGCTTTGGGCCAACAATTGCATATGGCAAATGGATAG | 1335 | 0.5221 | MVSWVRGKCVGNGAFGVVNVAISKRDNRVFAVKSVDCGRGLSGHQVEALENEIGILKRVASPHVVAYLGDDVTCEGTASFRNLHLEYMPGGTVADLDRADVDERLVRRFAWCLVSALRDVHAQGFVHCDVKGRNVLLSGDGEIVKLADFGTAVEIESSPAEMLLLSRGSPMWMAPEVVRRQRQGPESDVWSLGCTVIEIVTGKPAWEDRGVDTLTRIGYSDELPEFPKQLSELGKDFLEKCLRREHSERWSCDQLLQHPFLLPYYAVAESSPRCVLDWVDSELNSESDCNDRDHQEDVFIKFTNSEEKSVIKNRISKFATESRVNWETQGWIVVREIESNGKPTTTGTETEIEEGACTCECDGVGSSKEGVNWEFHNVAGTGMEYSDSVGVNRGIGKLGGSNTAGGGGGWSCRQDKVTRSMPHGHAYAAITLFALGQQLHMANG | 444 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma02g02161 | 444 | PANTHER | CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED | 2 | 361 | - | - | |
Gma02g02161 | 444 | Gene3D | Transferase(Phosphotransferase) domain 1 | 3 | 330 | - | - | |
Gma02g02161 | 444 | ProSiteProfiles | Protein kinase domain profile. | 4 | 261 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma02g02161 | 444 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 125 | 137 | IPR008271 | GO:0004672|GO:0006468 | |
Gma02g02161 | 444 | CDD | STKc_MAPKKK | 3 | 261 | - | - | |
Gma02g02161 | 444 | SMART | serkin_6 | 4 | 261 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma02g02161 | 444 | Pfam | Protein kinase domain | 6 | 261 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma02g02161 | 444 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 317 | IPR011009 | - | |
Gma02g02161 | 444 | ProSitePatterns | Protein kinases ATP-binding region signature. | 10 | 33 | IPR017441 | GO:0005524 | |
Gma02g02161 | 444 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14 | 2 | 361 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma02g02161 | Gma-Chr2 | 47467272 | 47471932 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma02g02161 | 4 | 336 | MAP Kinase Kinase Kinase | AT2G30040 | 57.270 | 3.22e-121 | 359 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | STE_STE11 | Gma02g02161 | Pkinase | 3.6e-53 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma02g02161 | - | - | gmx:100807131 | 818.15 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma14g01938 | 14 | 50154092 | 50155690 | Gma02g02161 | 02 | 47467272 | 47471932 | GST | |
Gma18g00572 | 18 | 5541056 | 5547513 | Gma02g02161 | 02 | 47467272 | 47471932 | PCT | |
Gma11g01903 | 11 | 23999680 | 24002127 | Gma02g02161 | 02 | 47467272 | 47471932 | PCT | |
Gma02g02161 | 02 | 47467272 | 47471932 | Gma18g00572 | 18 | 5541056 | 5547513 | PCT | |
Gma02g02161 | 02 | 47467272 | 47471932 | Gma11g01903 | 11 | 23999680 | 24002127 | PCT |