Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02160 ATGTCTTGCTCCGTCGCGGTTTCCAATTCGCCGGTGTTCTCTCCTTCTTCTTCCCTCTTCTGCTCGAAGCCCTCCATCATCTCTTCTTCGCCGGAATCCCTCTCGCTCTCTCTCTCGCATCTCAAACCTTCCAACTCTTCTACGACGTCGTCTTGTTCTTCACCCTCTGCTGCTGCTTCTTCATCTTCTTCTCCTTCTTCTCCGTTTCGGCTTCGCCTTCCCAAGCCTCCCACCGTGTTCTCTGCTTCTTCTTCTGCTTCGTCTACCTCTCCGAACGGCACCGTTTTGAAGAGGAAGCGACCCGCTAGGTTGGACATACCCGTTTCCTCTCTCACCTTTGCGGTTCCGCCCACGCCCTCCGCGGCGGCGCGTGACTTGGTCGAGGCTGAGGAAGATGGGTTTGGGGTGTACTGCAAGAGAGGCAGGAGGGAGTACATGGAGGATCGTTACACCGCTGGGAATAATCTTCGCGGAGAACACAAACTGGCTTTTTTTGGCATATTTGATGGGCACGGTGGTGCAAAAGCTGCTGAATTTGCTGCAAATAACTTGCAAAAGAATGTGTTAGATGAAGTTATTGTGAGAGATGAAGATGATGTTGAGGAGGCAGTGAAGCGTGGGTACCTGAACACCGATTCGGATTTCCTAAAGGAGGATCTCCATGGTGGCTCTTGCTGTGTGACAGCATTGATTAGGAATGGTAACCTCGTTGTGTCCAACGCGGGTGATTGCCGTGCTGTCATTAGCAGAGGGGGTGTTGCTGAGGCCCTAACATCTGATCACAGGCCTTCAAGGGAAGATGAAAGGGACAGAATTGAGAGCCTGGGTGGCTATGTCGATTTATGCCGCGGTGTTTGGAGGATCCAGGGATCTCTGGCTGTGTCAAGGGGAATTGGAGATAGACACCTGAAACAATGGGTGACAGCAGAACCTGAGACCAAAGTTCTCCGAATTGAACCTGAACATGACTTGTTAATTTTAGCTTCAGATGGATTATGGGATAAGGTTGGTAATCAGGAAGCAGTAGATATTGCTCGTTCTTTTCTCGTAGGCAACAACAAATCACAACCATTGCTGCAGGCTTGTAAAAAGCTTGTAGATTTGTCTGTTTCACGAGGCTCTTTGGATGATACAAGTGTCATGCTAATCAAATTGGAGCACTATATTTAA 1170 0.494 MSCSVAVSNSPVFSPSSSLFCSKPSIISSSPESLSLSLSHLKPSNSSTTSSCSSPSAAASSSSSPSSPFRLRLPKPPTVFSASSSASSTSPNGTVLKRKRPARLDIPVSSLTFAVPPTPSAAARDLVEAEEDGFGVYCKRGRREYMEDRYTAGNNLRGEHKLAFFGIFDGHGGAKAAEFAANNLQKNVLDEVIVRDEDDVEEAVKRGYLNTDSDFLKEDLHGGSCCVTALIRNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDERDRIESLGGYVDLCRGVWRIQGSLAVSRGIGDRHLKQWVTAEPETKVLRIEPEHDLLILASDGLWDKVGNQEAVDIARSFLVGNNKSQPLLQACKKLVDLSVSRGSLDDTSVMLIKLEHYI 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02160 389 SMART PP2C_4 123 383 IPR001932 -
Gma02g02160 389 MobiDBLite consensus disorder prediction 78 95 - -
Gma02g02160 389 CDD PP2Cc 133 385 IPR001932 -
Gma02g02160 389 Pfam Protein phosphatase 2C 134 377 IPR001932 -
Gma02g02160 389 MobiDBLite consensus disorder prediction 37 69 - -
Gma02g02160 389 MobiDBLite consensus disorder prediction 37 101 - -
Gma02g02160 389 ProSiteProfiles PPM-type phosphatase domain profile. 133 385 IPR001932 -
Gma02g02160 389 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 3 388 - -
Gma02g02160 389 Gene3D - 124 388 IPR036457 -
Gma02g02160 389 SMART PP2C_SIG_2 131 385 IPR001932 -
Gma02g02160 389 ProSitePatterns PPM-type phosphatase domain signature. 164 172 IPR000222 GO:0043169
Gma02g02160 389 PANTHER PROTEIN PHOSPHATASE 2C 3 388 IPR015655 GO:0004722|GO:0006470
Gma02g02160 389 SUPERFAMILY PP2C-like 134 386 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02160 Gma-Chr2 47452546 47454990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02160 1 389 PP2C-type Phosphatase Gene Family AT2G30020 64.604 4.15e-169 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02160 K17506 - gmx:100797934 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01937 14 50128419 50130395 Gma02g02160 02 47452546 47454990 GST
Gma18g00573 18 5558314 5560499 Gma02g02160 02 47452546 47454990 PCT
Gma11g01909 11 24061180 24063036 Gma02g02160 02 47452546 47454990 PCT
Gma02g02160 02 47452546 47454990 Gma18g00573 18 5558314 5560499 PCT
Gma02g02160 02 47452546 47454990 Gma11g01909 11 24061180 24063036 PCT