Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02134 ATGGTGAGAGGAGAAAGTCATGGTGGTGATAATGGCTCTCAAATTTATGGCTATGAAGCTATAAACGCTAGCAACCCTCCTTTGACAGCCATAGATAGATTCCTATGTGGCCACTTTTCTCACCAACAACAACATGCAAGAAACAATGACGCAAGTGTTTTTGCTGCTGAGGAGGTTTTTAATAATAAGTGGACACACATCAACCAAACCCCTACACTGTGCATGAAAAATATGCAAGTTTCAGGTAAAAATGCGAAAGTGGTGGGAAGGAGAAGCAAGAAACAGTCTTCTGTGTGTTGGATCAAAGGACAGTGGAATCAAGAAGAGGACAGGAAACTGATAATGTTGGTGAAGCAATATGGTGAAAGAAAATGGGCTGAAATAGCTGAGAAGTTGGAAGGAAGGGTTGGCAAGCAGTGTCGAGAAAGATGGAATAATCATTTGCGTCCTGATATTAAGAAAGATAGTTGGAGTGAAGAAGAAGAGAGGATATTAGTAGACACTCATGCCAGGGTCGGAAATCGTTGGTGCGAGATAGCAAAACGTATTCAAGGAAGATCAGAGAATGCCATAAAGAACCATTGGAATGCCACCAAAAGGAGACAGAATTCAAAGAGAAAGAACAAGAAGACAAAAAGCTCTATTAATGGAAAGCCACATATACTTGAAGACTACATCAGAAGCAAGACTCAAATAATTACTAACAGCAACCCTACAATTGGATCCATCTCTACCACAGATACCACCCCTCACATAACACTCTCACAGGACAGTGCTGCATACCCTTTAAACCCTGTGTTCTATGAACCTTTTGCAAATGAACTACTCTCCATGCAACAAATTTTCACGGAGAATGTTGAAGCCTCTAAGCACCCCAAGATATCTCCAACTTCATACTTGGATTATTGTCAAATGAATGTTGATGATGTGGGTGAGTGTGAGTATTCACTCCAATACCCAGATAATAACAACATGCACTTGAATGATACTAGTCTCTTCCCTAGAGAGACTCATCCTACCCCCTCAAATCACCTTCCTTCGGATCTCTATTATCCCTCTCACTTGTTCAACGTAGTAACCAGTAATTATGGGAACCAAAATCTGTATAACATGGATTTTCGGCATCAAGGATGTTCAGATGTTAAAGGAGAGAGATGGATTTGA 1164 0.4064 MVRGESHGGDNGSQIYGYEAINASNPPLTAIDRFLCGHFSHQQQHARNNDASVFAAEEVFNNKWTHINQTPTLCMKNMQVSGKNAKVVGRRSKKQSSVCWIKGQWNQEEDRKLIMLVKQYGERKWAEIAEKLEGRVGKQCRERWNNHLRPDIKKDSWSEEEERILVDTHARVGNRWCEIAKRIQGRSENAIKNHWNATKRRQNSKRKNKKTKSSINGKPHILEDYIRSKTQIITNSNPTIGSISTTDTTPHITLSQDSAAYPLNPVFYEPFANELLSMQQIFTENVEASKHPKISPTSYLDYCQMNVDDVGECEYSLQYPDNNNMHLNDTSLFPRETHPTPSNHLPSDLYYPSHLFNVVTSNYGNQNLYNMDFRHQGCSDVKGERWI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02134 387 Gene3D - 101 153 - -
Gma02g02134 387 CDD SANT 105 148 IPR001005 -
Gma02g02134 387 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 153 203 IPR017930 -
Gma02g02134 387 MobiDBLite consensus disorder prediction 198 217 - -
Gma02g02134 387 ProSiteProfiles Myb-like domain profile. 149 199 IPR001005 -
Gma02g02134 387 SMART sant 101 150 IPR001005 -
Gma02g02134 387 SMART sant 153 201 IPR001005 -
Gma02g02134 387 MobiDBLite consensus disorder prediction 198 214 - -
Gma02g02134 387 PANTHER MYB TRANSCRIPTION FACTOR 4 375 - -
Gma02g02134 387 Gene3D - 156 220 - -
Gma02g02134 387 PANTHER MYB PROTEIN-RELATED 4 375 - -
Gma02g02134 387 CDD SANT 156 199 IPR001005 -
Gma02g02134 387 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 152 IPR017930 -
Gma02g02134 387 ProSiteProfiles Myb-like domain profile. 102 148 IPR001005 -
Gma02g02134 387 SUPERFAMILY Homeodomain-like 101 195 IPR009057 -
Gma02g02134 387 Pfam Myb-like DNA-binding domain 105 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02134 Gma-Chr2 47167087 47168603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02134 21 365 MYB Transcription Factor Family AT5G58850 41.514 6.96e-73 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma02g02134 Myb_DNA-bind_6 3.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02134 K09422 - gmx:102668713 801.971