Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02121 ATGAAGAAAACACCTCCCCCCAATTTGCATCAATCTAGCAAAAGTAGACAGAATGCTAATCTCCAACTTGTTGAAACAAACAATGATGCAAAGAGGCACAATTCTAAGACATTGAGATCTTTGAAGTATGCTGCCAAGAAATGTGTAGCTGTTTTTTCATTGATTATCTATGGCAAAAGAAAATCAGCCTCATATGTTGTTGGCAATGATGACAGGAAGAATACATCCAAAATTAGAGGGGTGGTATCATCATCAACTGATTTATCATCTGAGAGTACCACCAAGAATTCATCAAAATGGAAGTTTTCTTACTCCTATGCATCATCCAGCACTGCAAGTGGACAACTTGGAATTGGCAACTTCTCCTTTGAAGAAATTTACAAGTCAACGGCAAAATTCTCTCCAGTTAATGAAATTGGGCAAGGTGGCTTTGGAACTGTCTACAAGGGAAAGCTTAATGATGGATCTATTGTCGCTGTGAAGCGTGCCAAGAAGGCTGTGATTCAGAATCACTTACATGAGTTCAAGAATGAAATATACACGTTGTCGCAAATTGAGCATCGGAATCTTGTGAGGTTGTATGGATATTTGGAGCATGGAGATGAGAAGATTATTGTTGTTGAATATGTTGGTAATGGTAACCTTCGAGAACATCTAGATGGTATTCGGGGAGAAGGACTAGAAATCGGGGAGCGTCTAGACATAGCAATTGATGTAGCTCATGCAATAACTTACCTTCATATGTACACGGATAATCCAATTATCCATAGAGACATCAAAGCATCGAACATCCTAATCACGGAGAACCTAAAGGCCAAAGTGGCAGATTTTGGTTTTGCTCGGTTGTCTGACGATCCTAATGCAACTCATATTTCAACTCAAGTTAAAGGAACAGCTGGATACATGGATCCTGAGTATCTTAGAACATACCAACTCACTGAAAAGAGTGATGTTTATTCCTTTGGTGTATTGCTTGTTGAAATGATGACAGGACGACATCCAATAGAACCAAAGAGACCAGTTGATGAGAGAGTGACAATCAGATGGGCAATGAAGATGCTGAAACAAGGGGATGCTGTATTTGCCATGGACCCTAGGCTGAGAAGAAATTCAGCCTCCATCAAGGCAGTAAAGCAGGTTCTCAAGCTAGCTCTCCAATGCATTGCGCCTTCGAAACAATCACGTCCGCCTATGAAGAATTGTGCAGAGGTTCTGTGGGACATCCGCAAAAGTTTTAGAGATGAAGCCAATTCTGATCATGCTCCCCTTCCTTCTCACCATTCTGCAAACTTTCCTCAAAGAGAAAAGAATACGTTTGGTATGGAAGAAGATGACAGCTATAAATTTGTCTCTGTACCTAATCATATTCGTTCATAA 1377 0.4031 MKKTPPPNLHQSSKSRQNANLQLVETNNDAKRHNSKTLRSLKYAAKKCVAVFSLIIYGKRKSASYVVGNDDRKNTSKIRGVVSSSTDLSSESTTKNSSKWKFSYSYASSSTASGQLGIGNFSFEEIYKSTAKFSPVNEIGQGGFGTVYKGKLNDGSIVAVKRAKKAVIQNHLHEFKNEIYTLSQIEHRNLVRLYGYLEHGDEKIIVVEYVGNGNLREHLDGIRGEGLEIGERLDIAIDVAHAITYLHMYTDNPIIHRDIKASNILITENLKAKVADFGFARLSDDPNATHISTQVKGTAGYMDPEYLRTYQLTEKSDVYSFGVLLVEMMTGRHPIEPKRPVDERVTIRWAMKMLKQGDAVFAMDPRLRRNSASIKAVKQVLKLALQCIAPSKQSRPPMKNCAEVLWDIRKSFRDEANSDHAPLPSHHSANFPQREKNTFGMEEDDSYKFVSVPNHIRS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02121 458 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1 23 438 - -
Gma02g02121 458 Gene3D Transferase(Phosphotransferase) domain 1 210 427 - -
Gma02g02121 458 Pfam Protein tyrosine and serine/threonine kinase 137 405 IPR001245 GO:0004672|GO:0006468
Gma02g02121 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Gma02g02121 458 ProSiteProfiles Protein kinase domain profile. 133 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02121 458 PANTHER RECEPTOR-LIKE PROTEIN 55 23 438 - -
Gma02g02121 458 Coils Coil 16 36 - -
Gma02g02121 458 Gene3D Phosphorylase Kinase; domain 1 91 209 - -
Gma02g02121 458 CDD STKc_IRAK 139 405 - -
Gma02g02121 458 ProSitePatterns Protein kinases ATP-binding region signature. 139 165 IPR017441 GO:0005524
Gma02g02121 458 SMART serkin_6 133 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02121 458 SUPERFAMILY Protein kinase-like (PK-like) 114 406 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02121 Gma-Chr2 47043209 47047366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02121 105 398 Receptor kinase-like Gene Family AT1G79620 44.518 2.10e-73 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Gma02g02121 PK_Tyr_Ser-Thr 8.2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02121 - - gmx:100788236 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01898 14 49638758 49642752 Gma02g02121 02 47043209 47047366 GST
Gma02g02121 02 47043209 47047366 Gma18g00965 18 12023373 12027987 PCT
Gma02g02121 02 47043209 47047366 Gma08g02904 08 45345812 45349329 PCT