Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02118 ATGGGTTACTTATGTGATTTTTGTGGAGACCAGAGGTCCTTGGTGTACTGCCGCTCTGATTCCGCGTGCTTATGTTTGTCATGCGATCGAAATGTTCATTCTGCCAATGCACTTTCTAGGCGTCATTCGAGAACCCTTGTATGCGAGAGATGCAATTCACAACCTGCATTTGTGAGGTCTGTTGAAGAGAAAATTTCACTTTGTCAGAACTGTGATTGGTTGGGTCATGGTACCTCACCGTCTTCTTCGATGCACAAGAGGCAATCAATCAATTGCTACTCTGGCTGCCCTTCAGCGGCAGAATTTTCTTCAATATGGTCCTTTTTCTTAGACATCCCTTCTTTGGGTGAAGCATGTGAGCAGGAACTAGGTTTGATGAGCATTAATGAGAACATTCCTCCAGAAGGGCAGAATGTGTCTGGTTCAACTGAAGTGACTGATCTACCCAGCAAGGGTAAATCTTGGGCTGGCACACCTTCAATACCTGAGTCAAGCTCAGAACCTCGTATTCTGGACCAGCCGCCTGGACCTGCCAATGAATGTGTGCCCAAGTTGTACTGTCCTGGGAAGAAAGCTTCTGGAATATGTGAAGATGATGATCTATATGATGATTTCATCATGGATGAAGTTGATCTAGAACTTGAGAACTATGAGGAACTTTTTGGGATGGCTCTCAGTCACTCTGAAGAGCTTTTTGAAAATGGTGGAATTAATAGCTTATTTGAGGCAAAGGACATGTCTGCTAGTGCTGGTGATTCCCATTGTCAGGGTGCTGTTGCTGCTGAGGGATCGTCTGCTGGGTTGGTCAATCCTATCCAACCAGCATGCAGCAATGCAGCATCTGCAGATTCAGTGATGAGTACAAAAACTGAACCAATTGTTTGTTTTACGGCAAGGCAATCTCAATCAAACATTTCCTTTTCTGGTGTTACCAAAGATAGTGCTGGTGACTATCAAGACTGTGGTGCTTCTTCAATGCTTCTCATGGGAGAACCTCCCTGGTGTCCTCCTTGCCCTGAGAGTTCTCTGCATTCTGCTAACCGAAGCAATGCTGTCATGCGCTACAAGGAAAAAAAGAAGACCCGGAAGTTCGAGAAGAAAGTAAGATATGCCTCTCGCAAGGCTAGGGCTGATGTCAGAAAGCGTGTGAAGGGCCGATTTGTCAAAGCTGGTGATGTCTATGACTATGACCCTTTGAACCAAACCAGAAGCTACTGA 1218 0.454 MGYLCDFCGDQRSLVYCRSDSACLCLSCDRNVHSANALSRRHSRTLVCERCNSQPAFVRSVEEKISLCQNCDWLGHGTSPSSSMHKRQSINCYSGCPSAAEFSSIWSFFLDIPSLGEACEQELGLMSINENIPPEGQNVSGSTEVTDLPSKGKSWAGTPSIPESSSEPRILDQPPGPANECVPKLYCPGKKASGICEDDDLYDDFIMDEVDLELENYEELFGMALSHSEELFENGGINSLFEAKDMSASAGDSHCQGAVAAEGSSAGLVNPIQPACSNAASADSVMSTKTEPIVCFTARQSQSNISFSGVTKDSAGDYQDCGASSMLLMGEPPWCPPCPESSLHSANRSNAVMRYKEKKKTRKFEKKVRYASRKARADVRKRVKGRFVKAGDVYDYDPLNQTRSY 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02118 405 CDD Bbox1_BBX-like 4 47 - -
Gma02g02118 405 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Gma02g02118 405 CDD Bbox1_BBX-like 47 90 - -
Gma02g02118 405 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 9-LIKE 1 405 - -
Gma02g02118 405 ProSiteProfiles CCT domain profile. 348 390 IPR010402 GO:0005515
Gma02g02118 405 Pfam CCT motif 348 390 IPR010402 GO:0005515
Gma02g02118 405 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 405 - -
Gma02g02118 405 MobiDBLite consensus disorder prediction 136 176 - -
Gma02g02118 405 SMART bboxneu5 4 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02118 Gma-Chr2 47019302 47024349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02118 1 405 C2C2-CO-like Transcription Factor Family AT3G07650 55.819 3.58e-151 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma02g02118 CCT 7.5e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02118 - - gmx:100787695 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01892 14 49615110 49621225 Gma02g02118 02 47019302 47024349 GST