Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02114 ATGGGAGAGGGAGagaacacagaaatagaaatagaaatagaaacagaaacagaatcagaaGCAACATCGACGACATGGAGCCTCGGAAAACACACTCAGATAATCGGACTTTCGGAGAAGCTCATAAATGGGAACAACCTCAGCGCCAAGATTGAGGCCGCGAGGGAGATAAGGAAGATGGTTCGGAAATCGTCGTCGTCGTCGAAGACGCGCGCGAAGCTTGCCGCTGCGGGTGTGATCGAACCGCTCGTGCTGATGCTCTCTTCTTCCAACCTCGATGCTCGCCAATCCTCTCTCCTCGCTCTCCTCAACCTCGCTGTTCGCAACGAACGAAACAAGGTCAAAATAGTGACAGATGGTGTCATGCCTCCACTGGTGGAGCTCCTCAAGATGCAAAATAGCGGTATACGAGAATTAGCTACGGCTGCAATCTTGACACTCTCAGCTGCCACATCCAACAAGCCCATTATTGCTGCTTCTGGAGCTGGACCTCTCCTTGTTCAGATTCTCAAATCTGGAAGTGTTCAAGGAAAAGTTGATGCTGTTACAGCCCTCCATAATCTTTCTACTGGCATTGAGAATTCCATTGAACTTCTTGATGCAAGTGCTGTTTTCCCTCTGCTCAACCTCCTTAAAGAGTGCAAGAAGTATTCCAAGTTTGCAGAAAAAGCCACAGCACTGCTTGAAATCCTTTCCAACTCTGAAGAAGGACGAACTGCAATCTCAATTGCAGATGGTGGAATCTTAACGCTAGTAGAGACAGTTGAAGATGGATCACTTATCAGCACAGAACACGCTGTTGGAACTCTGCTATCATTATGTCGAAGCTGTCGAGATAAATACCGGGAACTGATTCTTAAAGAAGGAGCAATTCCGGGTCTGTTACGTCTGACAGTGGAGGGCACAGCTGAAGCTCAAGATAGAGCACGTGTGCTTCTGGATTTGCTGAGAGATTCTCCCCCAGAAAAAAGACTAACCTCAACAGTTTTGGAGAAAATTGTTTATGACATTGCTGAACGGGTAGATGGAGCAGATAAAGCTGCTGAAACTGCCAAACGGTTATTGCAAGATATGGTTCAAAGGAGTATGGAACACAGCATGAAATGCATCCAGCATAGGGCTGCATCTTGTACTCCTATTCCATCCACTTGA 1152 0.454 MGEGENTEIEIEIETETESEATSTTWSLGKHTQIIGLSEKLINGNNLSAKIEAAREIRKMVRKSSSSSKTRAKLAAAGVIEPLVLMLSSSNLDARQSSLLALLNLAVRNERNKVKIVTDGVMPPLVELLKMQNSGIRELATAAILTLSAATSNKPIIAASGAGPLLVQILKSGSVQGKVDAVTALHNLSTGIENSIELLDASAVFPLLNLLKECKKYSKFAEKATALLEILSNSEEGRTAISIADGGILTLVETVEDGSLISTEHAVGTLLSLCRSCRDKYRELILKEGAIPGLLRLTVEGTAEAQDRARVLLDLLRDSPPEKRLTSTVLEKIVYDIAERVDGADKAAETAKRLLQDMVQRSMEHSMKCIQHRAASCTPIPST 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02114 383 Pfam Armadillo/beta-catenin-like repeat 109 148 IPR000225 GO:0005515
Gma02g02114 383 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 120 162 IPR000225 GO:0005515
Gma02g02114 383 PANTHER U BOX DOMAIN-CONTAINING 28 350 - -
Gma02g02114 383 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 78 120 IPR000225 GO:0005515
Gma02g02114 383 SUPERFAMILY ARM repeat 41 323 IPR016024 -
Gma02g02114 383 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 28 350 - -
Gma02g02114 383 SMART arm_5 67 107 IPR000225 GO:0005515
Gma02g02114 383 SMART arm_5 108 149 IPR000225 GO:0005515
Gma02g02114 383 SMART arm_5 191 233 IPR000225 GO:0005515
Gma02g02114 383 SMART arm_5 234 275 IPR000225 GO:0005515
Gma02g02114 383 SMART arm_5 150 190 IPR000225 GO:0005515
Gma02g02114 383 Gene3D - 15 378 IPR011989 -
Gma02g02114 383 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 202 246 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02114 Gma-Chr2 46966461 46971705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02114 32 318 U-box Gene Family AT3G54790 37.847 1.03e-35 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02114 K08332 - gmx:100785760 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01888 14 49570007 49575535 Gma02g02114 02 46966461 46971705 GST