Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02067 ATGGAGCTTCAAGACCATGATTTCTTGGAGGAATTAATGTCTCTAAGAAGAGAAACATGGGATACCAATCCATGTTCACAAGAAAACCAGCTTTTCTCTAATGGCTGGAGTTTTGATTGTTTTGAGGATCAAAACTATCATCAAGCTTTTCCTCCAAACTCTTTCTCTTGCCAACAAGTTCCTCAAAGTTACAATAACAAAGGCTACAACTACAATGAAATTTATAGTTCCTTACTACATGAATTCTCTGCACCCCAAGTTATAGATTCATCATCCTATAACACCCTTGATACCTCTCCTTTTCTGGCTCAAGAAGATTATCCATTGTCCATGATGGAAGAAGAAGATCCGGGCTTTCTTGGGGAAGAGCTTCATTGTTTGGACCTTCAAACCACATGCAAAATGGAGCCAAGCCATTCCACTGAAATGCCTATTTTCAACACAACTTCATCATTTGTGGAGAGAAAGAATAGAGCAAAGAAGCTTCAGGGGCAGCCTTCAAAGAACCTAATGGCAGAGAGGAGAAGAAGAAAGAGGTTAAATGACAGGCTCTCCATGCTAAGATCAATTGTGCCTAAGATAAGTAAGATGGACAGAACAGCTATACTTGGAGACACTATCGGTTATATGAAGGAGCTCTTGGAAAAGATTAATAATTTGAAGCAAGAAATAGAAGTGGATTCAAACATGGCTGGCATTTTCAAGGATGTGAAGCCAAACGAAATCATAGTGAGAAATTCTCCAAAGTTTGATGTGGAGAGGAGAAATGTCAATACAAGGGTGGAGATCTGCTGTGCAGGGAAGCCAGGCTTGTTGCTGGCTACCGTAAACACCTTGGAAACATTAGGCGTCGAGATCCAACAATGCGTCATTAGCTGTTTCAATGATTTCACAGTGCAAGCTTCTTGCTCAGAGGAATTGCTGCAGAAGACAATTCTGAGTTCTGAAGATATAAAGCAAGCACTATTTAGAAGCGCAGGATATGGTGGACGATATTTGTGA 1002 0.4042 MELQDHDFLEELMSLRRETWDTNPCSQENQLFSNGWSFDCFEDQNYHQAFPPNSFSCQQVPQSYNNKGYNYNEIYSSLLHEFSAPQVIDSSSYNTLDTSPFLAQEDYPLSMMEEEDPGFLGEELHCLDLQTTCKMEPSHSTEMPIFNTTSSFVERKNRAKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILGDTIGYMKELLEKINNLKQEIEVDSNMAGIFKDVKPNEIIVRNSPKFDVERRNVNTRVEICCAGKPGLLLATVNTLETLGVEIQQCVISCFNDFTVQASCSEELLQKTILSSEDIKQALFRSAGYGGRYL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02067 333 PANTHER DNA BINDING PROTEIN 3 333 - -
Gma02g02067 333 Coils Coil 210 230 - -
Gma02g02067 333 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 3 333 - -
Gma02g02067 333 CDD ACT_UUR-ACR-like 259 322 - -
Gma02g02067 333 Gene3D - 153 228 IPR036638 GO:0046983
Gma02g02067 333 Pfam Helix-loop-helix DNA-binding domain 170 213 IPR011598 GO:0046983
Gma02g02067 333 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 164 213 IPR011598 GO:0046983
Gma02g02067 333 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 168 226 IPR036638 GO:0046983
Gma02g02067 333 SMART finulus 170 219 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02067 Gma-Chr2 46359749 46362134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02067 144 333 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 60.101 3.89e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma02g02067 HLH 1.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02067 - - gmx:100818341 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02067 02 46359749 46362134 Gma02g02067 02 46359749 46362134 ECH
Gma14g01836 14 48953509 48955712 Gma02g02067 02 46359749 46362134 GST