Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02053 ATGTCTCTTCTCCTCGTTGTAACTATTTTGAGACCACCTCTTCTTCATCATATTTACCTCTACATCCCTTTTATGCATTATATGTCATCTCAGACATTGATAAGAAGGATGGCTCGAGAAAGTAAATATAAAGAGTGTGTATGTGCTGCAATATTCACCAAAAACGAGCTCCTGCTGAAACAAAATGACTTGGTCTCGCAGGTGATACATGTGGCAAAGTTTGTATGTCACCAGCATGACATTGAGAGAAGGGAGAAAAAAAAGATGAGTTGGAAGATCGATTGCAGAGGGTATGGAGCAAGACGACAAAGAGCTAAATATCTCAGGCAGACGGGAAGATTGCGTGGTTATGCCCGAGAGAATTGCAATAGAATGTCAAAGCAAGCAAAATATCTTTCCAGAAAACTAGCAAGGTGTTGGAGGCGGTTTGTAAGGCAAAAGAGAACAACATTTACCTTCACAAAAGCATATGATGTGCTGGGGATCAATGAGAAATCTGTCAAGTCAATGCCTTTTGAACAACTTGCTCTTCTGATTGAATCGGCTTCTACTCTTCAGACTGTGAAAAATTTACTTGACTTGGCTCCTGCCAACAATTTGTCTAGCTTGGATAACATTGATAATCTTCTTAAATGGGTTGCTTACCCCAAGAAAAAGGCTACTTCCAAGAGTTTTATGAGAAGCCGGCAGGCAAAGAAAGTAGATTCAGTCAGGGAGTCAAACAATAGCTTAGTTAGGTTATCAAGGTATCCTGTGAGAGTTGTTCTTTGTGGTTATATGATATTGGGTCATCCAGATGCCGTTTTCAGTGGAATGGGAGAATGTGAGAATACTCTAGCCAAATTTGCACAAGAGTTTGTCCAAATGTTTGAGTTGTTGATAAAGATTATACTAGATGGTCCAATACAAAGTTCTGATGAAGAATCTCAGCTTGCTGCTTTTGATAAGGCTTGGTGCTCATACTTGAATTGTTTTTTGCTTGAAGCTTCTATGATTCAAACTTGCAAGTTAACTCTAGAAGGAGCTGGTGGTAAGTTTAGTCATGATATGAAAGCTATTCAGCATCAGGTCTCTGAAGATCAAAAACTTTTGAGAGAAAAGTTGTTGCACTTGAGTGGAGTTGCTGGAATTGATCGTATGGAATATGCATTATCTGAAACAAGATCTACATACTTTGGAGTGAAGGATGATGGAAGTCCAGTGGGGTCTCCAATGATTTTGTCTATGCCCACAAGCCCAACTCCACTTTCTACTACTGCCAGCTCAAGTGAAACAAATATTTCTTATGAGAGTAATGATAGGGCAAGCCGAGTAGTTCGCTCCCTCTTTAAGGAAACAAACACTTCCCCTGGAGAGTCTAACTTCTCTTCACCCAGAACAAGTTCAGATAGTCAGCTTGGCACATCTTCTGAGAAGTTGCTAGTAGAGAATGAGGTTCTTGTAAATGAATTTCTTCACGAGCATCACTATAGTGTTATCGATGAATTTGATGTCTCTGATCACATTCAAAACAATGTTGAGGGGAAAATAAAGCAGACAATGGAAAAGGCCTTTTGGGATGGTATCATGGAAAATGAAGcaggtgtagtaggccttgcatcattttcttctcatgacatggGAACTGTGGCATGGGTGGTCAATTATGAAATTTATCCCTTATGGTATTGGGATGTTGTTTGGAGTGAAGCTAGAAGTATAGGAACAATTGAGACATTTGAACGGATTGTGGGAACAAGTTTTAATGTTGTAAGTGAAAATGAGGAACAGGTTGAAATCTCATTCACAAGAAAGTGGAATCCATCTCTGAAGGGAAAGAGAGCACCTCTAAATATTGACAAAAGGTATGCGATGCTTCGTAATTCCACAGGCTTCTACTCTTATGCCATCTTTGAACACCTAAAGGAGTGGCCTGCTTTCAACATACCTCAAATAAGGATTGTTTACAAGCTTCGTAAAGACAAGATGAAGGAGGAGGTTCAAAGATGGCCCTATGATTTTCCAACTTCTGAAGGTTTTCAAAAGTCTAGCCAACGTGACAGTTTGTGTGGCACATTACTAATTCGAGACAGGGATACCAACTAG 2085 0.389 MSLLLVVTILRPPLLHHIYLYIPFMHYMSSQTLIRRMARESKYKECVCAAIFTKNELLLKQNDLVSQVIHVAKFVCHQHDIERREKKKMSWKIDCRGYGARRQRAKYLRQTGRLRGYARENCNRMSKQAKYLSRKLARCWRRFVRQKRTTFTFTKAYDVLGINEKSVKSMPFEQLALLIESASTLQTVKNLLDLAPANNLSSLDNIDNLLKWVAYPKKKATSKSFMRSRQAKKVDSVRESNNSLVRLSRYPVRVVLCGYMILGHPDAVFSGMGECENTLAKFAQEFVQMFELLIKIILDGPIQSSDEESQLAAFDKAWCSYLNCFLLEASMIQTCKLTLEGAGGKFSHDMKAIQHQVSEDQKLLREKLLHLSGVAGIDRMEYALSETRSTYFGVKDDGSPVGSPMILSMPTSPTPLSTTASSSETNISYESNDRASRVVRSLFKETNTSPGESNFSSPRTSSDSQLGTSSEKLLVENEVLVNEFLHEHHYSVIDEFDVSDHIQNNVEGKIKQTMEKAFWDGIMENEAGVVGLASFSSHDMGTVAWVVNYEIYPLWYWDVVWSEARSIGTIETFERIVGTSFNVVSENEEQVEISFTRKWNPSLKGKRAPLNIDKRYAMLRNSTGFYSYAIFEHLKEWPAFNIPQIRIVYKLRKDKMKEEVQRWPYDFPTSEGFQKSSQRDSLCGTLLIRDRDTN 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02053 694 PANTHER TESTIS-SPECIFIC PROTEIN PBS13 T-COMPLEX 11 34 525 IPR008862 -
Gma02g02053 694 MobiDBLite consensus disorder prediction 446 469 - -
Gma02g02053 694 MobiDBLite consensus disorder prediction 407 432 - -
Gma02g02053 694 Pfam Rhamnogalacturonate lyase family 545 657 IPR010325 -
Gma02g02053 694 PANTHER T-COMPLEX PROTEIN 11 34 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02053 Gma-Chr2 46185866 46193986 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02053 556 656 Polysaccharide Lyase AT1G09910 57.426 4.38e-31 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02053 - - gmx:100811199 765.377